RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 MFGE8Q08431 387 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-208ENST00000548436 TMEM69Q5SWH9 247 aa16.64■□□□□ 0.25
PRPF40B-208ENST00000548436 ABHD6Q9BV23 337 aa16.64■□□□□ 0.25
PRPF40B-208ENST00000548436 GTPBP2Q9BX10 602 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-208ENST00000548436 HRASLSQ9HDD0 168 aa16.64■□□□□ 0.25
PRPF40B-208ENST00000548436 KLHL9Q9P2J3 617 aa16.64■□□□□ 0.25
PRPF40B-208ENST00000548436 SULT1B1O43704 296 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 KRT33AO76009 404 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 H2AFB2P0C5Z0 115 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 APOBEC1P41238 236 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 FOXF1Q12946 379 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 EIF2B1Q14232 305 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 GSG1Q2KHT4 349 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 OR7E24Q6IFN5 339 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 KRT77Q7Z794 578 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 ZNF248Q8NDW4 579 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 OR6S1Q8NH40 331 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 MFSD8Q8NHS3 518 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 RNF138Q8WVD3 245 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 TSEN15Q8WW01 171 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 ASB10Q8WXI3 467 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 SPSB2Q99619 263 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 TRAF4Q9BUZ4 470 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 OR51J1Q9H342 316 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 GTF2A1LQ9UNN4 478 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 EML6Q6ZMW3 1958 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 CFAP54Q96N23 3096 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 IFNGR1P15260 489 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 STOMP27105 288 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 CRABP1P29762 137 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 CCKBRP32239 447 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 SUMO3P55854 103 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 GLO1Q04760 184 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 FMODQ06828 376 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 ZP4Q12836 540 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 HLA-BQ31612 363 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 SFRP4Q6FHJ7 346 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 LAMTOR1Q6IAA8 161 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 ASPHD2Q6ICH7 369 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 CPEB2Q7Z5Q1 589 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 GLB1L2Q8IW92 636 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 FCAMRQ8WWV6 532 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 MS4A3Q96HJ5 214 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 OR2M2Q96R28 347 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 AKIRIN1Q9H9L7 192 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 STEAP1Q9UHE8 339 aa16.63■□□□□ 0.25
PRPF40B-208ENST00000548436 VPS13AQ96RL7 3174 aa16.62■□□□□ 0.25
PRPF40B-208ENST00000548436 EFNA2O43921 213 aa16.62■□□□□ 0.25
PRPF40B-208ENST00000548436 SYPP08247 313 aa16.62■□□□□ 0.25
PRPF40B-208ENST00000548436 KCTD18Q6PI47 426 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-208ENST00000548436 H1FNTQ75WM6 255 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-208ENST00000548436 BEST4Q8NFU0 473 aa16.62■□□□□ 0.25
PRPF40B-208ENST00000548436 GIMAP1Q8WWP7 306 aa16.62■□□□□ 0.25
PRPF40B-208ENST00000548436 PHF21AQ96BD5 680 aa16.62■□□□□ 0.25
PRPF40B-208ENST00000548436 AKAP7Q9P0M2 348 aaPredicted RBP16.62■□□□□ 0.25
PRPF40B-208ENST00000548436 PILRBQ9UKJ0 227 aa16.62■□□□□ 0.25
PRPF40B-208ENST00000548436 LRP12Q9Y561 859 aa16.62■□□□□ 0.25
PRPF40B-208ENST00000548436 FABP7O15540 132 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 AKR7A2O43488 359 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 RAG2P55895 527 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 DLX5P56178 289 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 TAS2R20P59543 309 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 ST3GAL2Q16842 350 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 FAM69BQ5VUD6 431 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 ZNF227Q86WZ6 799 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 PLCZ1Q86YW0 608 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 C20orf85Q9H1P6 137 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 KLRF1Q9NZS2 232 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 IGKV1D-43A0A0B4J1Z2 117 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 NPIPA5E9PKD4 350 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 H3BML4 177 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 ECDO95905 644 aaPredicted RBP16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 ONECUT2O95948 504 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 NAGAP17050 411 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 CXCL3P19876 107 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 S100A1P23297 94 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 PTGS2P35354 604 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 PTGDSP41222 190 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 RIDAP52758 137 aaKnown RBP16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 CD276Q5ZPR3 534 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 PMS2CLQ68D20 193 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 LYPD8Q6UX82 237 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 CATSPERDQ86XM0 798 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 EID2Q8N6I1 236 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 SLC26A10Q8NG04 563 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 OR11G2Q8NGC1 345 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 OR5L2Q8NGL0 311 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 OR52N5Q8NH56 324 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 OR56B4Q8NH76 319 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 LILRB4Q8NHJ6 448 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 MAFAQ8NHW3 353 aaPredicted RBP16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 TTC9Q92623 222 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 KCNK17Q96T54 332 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 CRB3Q9BUF7 120 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 BEX1Q9HBH7 125 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 OCIAD1Q9NX40 245 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 MED29Q9NX70 200 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 NPIPA1Q9UND3 350 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 FLVCR2Q9UPI3 526 aa16.61■□□□□ 0.25
PRPF40B-208ENST00000548436 A6NIZ1 184 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms