RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 RASD2Q96D21 266 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 CHID1Q9BWS9 393 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 OR52D1Q9H346 318 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 SIAEQ9HAT2 523 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 CBLN4Q9NTU7 201 aa16.24■□□□□ 0.19
PRPF40B-206ENST00000547764 DHRS12A0PJE2 317 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 SLC22A23A1A5C7 686 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 PRSS37A4D1T9 235 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 MGRN1O60291 552 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 ATP5HO75947 161 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 CCNB2O95067 398 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 NPR2P20594 1047 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 RASSF2P50749 326 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 ATP5J2P56134 94 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 TSPAN31Q12999 210 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 KRR1Q13601 381 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 RAB39AQ14964 217 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 SGCAQ16586 387 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 SLC36A2Q495M3 483 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 C11orf71Q6IPW1 123 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 ZNF770Q6IQ21 691 aaPredicted RBP16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 DPPA2Q7Z7J5 298 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 ZNF584Q8IVC4 421 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 OR4F15Q8NGB8 312 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 REEP1Q9H902 201 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 RNF121Q9H920 327 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 CA10Q9NS85 328 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 SLC7A8Q9UHI5 535 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 FBXL3Q9UKT7 428 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 SAMHD1Q9Y3Z3 626 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 U3KQV3 271 aa16.23■□□□□ 0.19
PRPF40B-206ENST00000547764 SOCS2O14508 198 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 AHCYL1O43865 530 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 PPP1R3DO95685 299 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 TXNDC12O95881 172 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 GASTP01350 101 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 SERPINA5P05154 406 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 RPS6KA3P51812 740 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 ETFDHQ16134 617 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 TMEM53Q6P2H8 277 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 VHLLQ6RSH7 139 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 PRSS57Q6UWY2 283 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 YTHDF3Q7Z739 585 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 SPATA24Q86W54 205 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 NUP37Q8NFH4 326 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 TRMT61AQ96FX7 289 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 SAMD8Q96LT4 415 aa16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 ZNF469Q96JG9 3925 aaPredicted RBP16.22■□□□□ 0.19
PRPF40B-206ENST00000547764 MED13LQ71F56 2210 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 CST1P01037 141 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 MMP7P09237 267 aaPredicted RBP16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 ZNF35P13682 527 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 APEHP13798 732 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 SLC6A6P31641 620 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 MICAQ29983 383 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 FAM27BQ5VT28 67 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 ZNF620Q6ZNG0 422 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 FOXL2NBQ6ZUU3 175 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 PTCHD4Q6ZW05 846 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 ERMAPQ96PL5 475 aaPredicted RBP16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 TMUB1Q9BVT8 246 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 IFT27Q9BW83 186 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 KCNN2Q9H2S1 579 aa16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 VSX1Q9NZR4 365 aaPredicted RBP16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 TEP1Q99973 2627 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-206ENST00000547764 A0A1W2PPL8 197 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 TCRBV3S1A0A5B6 114 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 IMPA2O14732 288 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 CD99P14209 185 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 CTLA4P16410 223 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 HOXB6P17509 224 aaKnown RBP16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 SERPINF1P36955 418 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 CDKN2AP42771 156 aaKnown RBP16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 GUCA1AP43080 201 aaPredicted RBP16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 ERFP50548 548 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 ADIPOQQ15848 244 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 MST1LQ2TV78 715 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 KRT80Q6KB66 452 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 ADCK1Q86TW2 530 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 AQP11Q8NBQ7 271 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 FBXO17Q96EF6 278 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 CACNG6Q9BXT2 260 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 SYT4Q9H2B2 425 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 EGLN3Q9H6Z9 239 aa16.2■□□□□ 0.18
PRPF40B-206ENST00000547764 ARPC3O15145 178 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 SLC16A7O60669 478 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 NDUFS7O75251 213 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 SCG5P05408 212 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 OR4A8P0C604 315 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 ZNF32P17041 273 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 NR4A1P22736 598 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 LAP3P28838 519 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 THBS4P35443 961 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 SNTB2Q13425 540 aaKnown RBP16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 DAG1Q14118 895 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 SWI5Q1ZZU3 235 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 SLC30A7Q8NEW0 376 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 ZNF442Q9H7R0 627 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 CCNB1IP1Q9NPC3 277 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 POLE4Q9NR33 117 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms