RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 ZNF101Q8IZC7 436 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 C10orf53Q8N6V4 93 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 OR5J2Q8NH18 312 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 ZNF566Q969W8 418 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 UPRTQ96BW1 309 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 MARS2Q96GW9 593 aaKnown RBP11.32□□□□□ -0.6
CCDC59-202ENST00000547758 RHOXF2Q9BQY4 288 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 NUF2Q9BZD4 464 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 TPT1P8Q9HAU6 139 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 BCL2L10Q9HD36 194 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 TMEM106BQ9NUM4 274 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 AIG1Q9NVV5 245 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 C1RLQ9NZP8 487 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 SELENONQ9NZV5 590 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 CGGBP1Q9UFW8 167 aaPredicted RBP11.32□□□□□ -0.6
CCDC59-202ENST00000547758 ZDHHC8Q9ULC8 765 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 RAP2CQ9Y3L5 183 aa11.32□□□□□ -0.6
CCDC59-202ENST00000547758 SRRM5B3KS81 715 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 PLXNB1O43157 2135 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 ANP32DO95626 131 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 MMP7P09237 267 aaPredicted RBP11.31□□□□□ -0.6
CCDC59-202ENST00000547758 PRKAR1BP31321 381 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 RBMXP38159 391 aaKnown RBP11.31□□□□□ -0.6
CCDC59-202ENST00000547758 LIPAP38571 399 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 WNT5AP41221 380 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 RPL14P50914 215 aaKnown RBP11.31□□□□□ -0.6
CCDC59-202ENST00000547758 KRTAP10-3P60369 221 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 ABCE1P61221 599 aaKnown RBP11.31□□□□□ -0.6
CCDC59-202ENST00000547758 NCALDP61601 193 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 BTG1P62324 171 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 HSF2Q03933 536 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 NRN1LQ496H8 165 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 MBNL2Q5VZF2 373 aaKnown RBP11.31□□□□□ -0.6
CCDC59-202ENST00000547758 SLC35D2Q76EJ3 337 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 COMTD1Q86VU5 262 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 LRRC28Q86X40 367 aaPredicted RBP11.31□□□□□ -0.6
CCDC59-202ENST00000547758 NUDCD3Q8IVD9 361 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 BBS10Q8TAM1 723 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 SLC25A40Q8TBP6 338 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 KLF14Q8TD94 323 aaPredicted RBP11.31□□□□□ -0.6
CCDC59-202ENST00000547758 VPS33AQ96AX1 596 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 SLC25A44Q96H78 314 aaPredicted RBP11.31□□□□□ -0.6
CCDC59-202ENST00000547758 PKNOX2Q96KN3 472 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 ZBTB18Q99592 522 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 RSPO3Q9BXY4 272 aaPredicted RBP11.31□□□□□ -0.6
CCDC59-202ENST00000547758 PRDM13Q9H4Q3 707 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 MEAF6Q9HAF1 191 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 TNFRSF19Q9NS68 423 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 IL20RAQ9UHF4 553 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 RYR3Q15413 4870 aa11.31□□□□□ -0.6
CCDC59-202ENST00000547758 TET2Q6N021 2002 aaPredicted RBP11.3□□□□□ -0.6
CCDC59-202ENST00000547758 A0A0B4J2E0 115 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 A0A1B0GX12 115 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 SLC22A31A6NKX4 558 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 OR6A2O95222 327 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 TGDSO95455 350 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 TSPAN15O95858 294 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 MT-ATP6P00846 226 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 SERPINE1P05121 402 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 QDPRP09417 244 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 ZCCHC18P0CG32 403 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 PGA4P0DJD7 388 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 PGA3P0DJD8 388 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 SELEP16581 610 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 STOMP27105 288 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 ETV4P43268 484 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 TNFAIP6P98066 277 aaPredicted RBP11.3□□□□□ -0.6
CCDC59-202ENST00000547758 MELKQ14680 651 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 ZMYND11Q15326 602 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 TAF9Q16594 264 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 DEFB112Q30KQ8 113 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 GTDC1Q4AE62 458 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 ZMAT1Q5H9K5 638 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 PABPC1L2AQ5JQF8 200 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 FAM205BPQ63HN1 556 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 BTNL3Q6UXE8 466 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 LRRN1Q6UXK5 716 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 UNQ6126/PRO20091Q6UXV3 157 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 LRRC18Q8N456 261 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 ZNF283Q8N7M2 679 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 MAL2Q969L2 176 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 TMEM43Q9BTV4 400 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 OR2J1Q9GZK6 312 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 C20orf27Q9GZN8 174 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 MARCH7Q9H992 704 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 MSL2Q9HCI7 577 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 A4GALTQ9NPC4 353 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 EIF3KQ9UBQ5 218 aaKnown RBP11.3□□□□□ -0.6
CCDC59-202ENST00000547758 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.3□□□□□ -0.6
CCDC59-202ENST00000547758 LRCH1Q9Y2L9 728 aa11.3□□□□□ -0.6
CCDC59-202ENST00000547758 IL6P05231 212 aa11.29□□□□□ -0.6
CCDC59-202ENST00000547758 ETS2P15036 469 aa11.29□□□□□ -0.6
CCDC59-202ENST00000547758 ZNF84P51523 738 aa11.29□□□□□ -0.6
CCDC59-202ENST00000547758 PAX2Q02962 417 aa11.29□□□□□ -0.6
CCDC59-202ENST00000547758 HLXQ14774 488 aaPredicted RBP11.29□□□□□ -0.6
CCDC59-202ENST00000547758 PDCD1Q15116 288 aa11.29□□□□□ -0.6
CCDC59-202ENST00000547758 OR1Q1Q15612 314 aa11.29□□□□□ -0.6
CCDC59-202ENST00000547758 DHRS4L2Q6PKH6 230 aa11.29□□□□□ -0.6
CCDC59-202ENST00000547758 BRD3OSQ6XYD6 125 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms