RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 MS4A6EQ96DS6 147 aa9.71□□□□□ -0.85
NPAS3-205ENST00000547068 DTD2Q96FN9 168 aa9.71□□□□□ -0.85
NPAS3-205ENST00000547068 LINC00615Q96LM1 132 aaPredicted RBP9.71□□□□□ -0.85
NPAS3-205ENST00000547068 ZNF681Q96N22 645 aa9.71□□□□□ -0.85
NPAS3-205ENST00000547068 LRFN5Q96NI6 719 aa9.71□□□□□ -0.85
NPAS3-205ENST00000547068 NMNAT3Q96T66 252 aa9.71□□□□□ -0.85
NPAS3-205ENST00000547068 RSRP1Q9BUV0 290 aa9.71□□□□□ -0.85
NPAS3-205ENST00000547068 ATG5Q9H1Y0 275 aa9.71□□□□□ -0.85
NPAS3-205ENST00000547068 TMPRSS5Q9H3S3 457 aa9.71□□□□□ -0.85
NPAS3-205ENST00000547068 KCNK15Q9H427 330 aa9.71□□□□□ -0.85
NPAS3-205ENST00000547068 RPS10P5Q9NQ39 176 aa9.71□□□□□ -0.85
NPAS3-205ENST00000547068 PRDM7Q9NQW5 492 aa9.71□□□□□ -0.85
NPAS3-205ENST00000547068 FARSAQ9Y285 508 aaKnown RBP9.71□□□□□ -0.85
NPAS3-205ENST00000547068 NPIPA5A0A0B4J1W7 369 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 TEX13DA0A0J9YY54 714 aaPredicted RBP9.71□□□□□ -0.86
NPAS3-205ENST00000547068 EEF1E1-BLOC1S5C9J1V9 151 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 NPIPA7E9PJI5 369 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 LEFTY2O00292 366 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 CDC40O60508 579 aaKnown RBP eCLIP9.71□□□□□ -0.86
NPAS3-205ENST00000547068 ALOX12BO75342 701 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 IGHV2-5P01817 119 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 DBIP07108 87 aaKnown RBP9.71□□□□□ -0.86
NPAS3-205ENST00000547068 CD14P08571 375 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 TACSTD2P09758 323 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 OR8U8P0C7N1 319 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 NPIPA8P0DM63 369 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 OR8G3PP0DMU2 310 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 AVPR2P30518 371 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 ALKBH1Q13686 389 aaKnown RBP9.71□□□□□ -0.86
NPAS3-205ENST00000547068 FAM76BQ5HYJ3 339 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 ABHD17CQ6PCB6 329 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 DRAM2Q6UX65 266 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 RHOUQ7L0Q8 258 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 BPIFB2Q8N4F0 458 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 PAQR4Q8N4S7 273 aaPredicted RBP9.71□□□□□ -0.86
NPAS3-205ENST00000547068 OR4E2Q8NGC2 313 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 OR5K2Q8NHB8 316 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 ZNF417Q8TAU3 575 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 NUDCD2Q8WVJ2 157 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 TMEM106AQ96A25 262 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 CCDC74AQ96AQ1 378 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 ZNF514Q96K75 400 aaPredicted RBP9.71□□□□□ -0.86
NPAS3-205ENST00000547068 MICU1Q9BPX6 476 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 FRRS1LQ9P0K9 344 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 LPAR3Q9UBY5 353 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 ADAM18Q9Y3Q7 739 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 CSAG2Q9Y5P2 127 aa9.71□□□□□ -0.86
NPAS3-205ENST00000547068 TRBV5-5A0A0J9YX44 114 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 MCIDASD6RGH6 385 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 PEX12O00623 359 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 NRG2O14511 850 aaPredicted RBP9.7□□□□□ -0.86
NPAS3-205ENST00000547068 NDUFB2O95178 105 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 NID1P14543 1247 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 HLA-GP17693 338 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 HSD17B2P37059 387 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 RAB2AP61019 212 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 FHL1Q13642 323 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 KCNAB1Q14722 419 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 ALG11Q2TAA5 492 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 ZNF425Q6IV72 752 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 LYG2Q86SG7 212 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 ZNF619Q8N2I2 560 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 SMRP1Q8NCR6 262 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 SEH1LQ96EE3 360 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 PHB2Q99623 299 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 TEX101Q9BY14 249 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 IL36AQ9UHA7 158 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.7□□□□□ -0.86
NPAS3-205ENST00000547068 RHPN2P1A8MT19 583 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 FAM171A2A8MVW0 826 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 C2orf74A8MZ97 194 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 CYB5AP00167 134 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 CSN2P05814 226 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 CD2P06729 351 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 PSMB6P28072 239 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 RPL4P36578 427 aaKnown RBP9.7□□□□□ -0.86
NPAS3-205ENST00000547068 BCL6P41182 706 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 CSNK1EP49674 416 aaKnown RBP9.7□□□□□ -0.86
NPAS3-205ENST00000547068 IL13RA1P78552 427 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 CEBPEQ15744 281 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 C2orf76Q3KRA6 126 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 KRBOX4Q5JUW0 171 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 SLC35D3Q5M8T2 416 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 ZNF684Q5T5D7 378 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 TMEM244Q5VVB8 128 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 ZNF614Q8N883 585 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 SMARCD2Q92925 531 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 HLA-CQ95604 372 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 GUCD1Q96NT3 240 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 GGACTQ9BVM4 153 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 XKR8Q9H6D3 395 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 UBE2ZQ9H832 354 aaPredicted RBP9.7□□□□□ -0.86
NPAS3-205ENST00000547068 CHMP1AQ9HD42 196 aaPredicted RBP9.7□□□□□ -0.86
NPAS3-205ENST00000547068 UFSP2Q9NUQ7 469 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 TREM2Q9NZC2 230 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 GPR34Q9UPC5 381 aa9.7□□□□□ -0.86
NPAS3-205ENST00000547068 PCYT1BQ9Y5K3 369 aaPredicted RBP9.7□□□□□ -0.86
NPAS3-205ENST00000547068 SPTBP11277 2137 aa9.69□□□□□ -0.86
NPAS3-205ENST00000547068 LOC100509620A0A075B734 347 aa9.69□□□□□ -0.86
NPAS3-205ENST00000547068 IGKV1-8A0A0C4DH67 115 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms