RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 NSMAFQ92636 917 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 C1QTNF6Q9BXI9 259 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 NUAK2Q9H093 628 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 RACGAP1Q9H0H5 632 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 KCNN2Q9H2S1 579 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 TBC1D23Q9NUY8 699 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 FKBP7Q9Y680 259 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 ABCA12Q86UK0 2595 aa12.6□□□□□ -0.39
DDX54-203ENST00000546869 ABCA4P78363 2273 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 H7C1C5 153 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 ABCD4O14678 606 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 HS3ST1O14792 307 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 SLC16A7O60669 478 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 TMCC2O75069 709 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 RENP00797 406 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 IGFBP1P08833 259 aaPredicted RBP12.59□□□□□ -0.39
DDX54-203ENST00000546869 CST2P09228 141 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 MMP7P09237 267 aaPredicted RBP12.59□□□□□ -0.39
DDX54-203ENST00000546869 CTLA4P16410 223 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 ZNF14P17017 642 aaPredicted RBP12.59□□□□□ -0.39
DDX54-203ENST00000546869 LAP3P28838 519 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 CAPZA2P47755 286 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 DAPP51397 102 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 LCN6P62502 163 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 ZNF672Q499Z4 452 aaPredicted RBP12.59□□□□□ -0.39
DDX54-203ENST00000546869 KDM4DQ6B0I6 523 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 LEG1Q6P5S2 330 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 C20orf204Q6ZNR8 217 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 SLC16A14Q7RTX9 510 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 AMIGO2Q86SJ2 522 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 MDP1Q86V88 176 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 GLB1L2Q8IW92 636 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 ZNF611Q8N823 705 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 OR4K13Q8NH42 304 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 TEX47Q8TBZ9 253 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 NMNAT3Q96T66 252 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 SH3GL3Q99963 347 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 POLE4Q9NR33 117 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 KLHL21Q9UJP4 597 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 B9D1Q9UPM9 204 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 CACNA1DQ01668 2161 aa12.59□□□□□ -0.39
DDX54-203ENST00000546869 OR6C68A6NDL8 312 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 H3BN98 237 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 SOX14O95416 240 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 RAB36O95755 333 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 PLAUP00749 431 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 PTHP01270 115 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 CRYAAP02489 173 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 SERPINA5P05154 406 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 CECR9P0C854 216 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 CD79AP11912 226 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 ZNF23P17027 643 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 MSR1P21757 451 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 CDAP32320 146 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 GRK5P34947 590 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 PCBD1P61457 104 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 LSM6P62312 80 aaKnown RBP12.58□□□□□ -0.4
DDX54-203ENST00000546869 ESRRGP62508 458 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 TUBA1BP68363 451 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 TUBA4AP68366 448 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 CDK5Q00535 292 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 NAAAQ02083 359 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 NOTCH2Q04721 2471 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDX54-203ENST00000546869 ETFDHQ16134 617 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 SGCAQ16586 387 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 SLC27A4Q6P1M0 643 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 TMEM53Q6P2H8 277 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 PAMR1Q6UXH9 720 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 TUBA1AQ71U36 451 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 OR6V1Q8N148 313 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 OR52E2Q8NGJ4 325 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 OR4Q3Q8NH05 313 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 FGFBP3Q8TAT2 258 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 GRIP2Q9C0E4 1043 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 C1orf198Q9H425 327 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 SEC61A2Q9H9S3 476 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 S100A14Q9HCY8 104 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 PAPOLBQ9NRJ5 636 aaKnown RBP12.58□□□□□ -0.4
DDX54-203ENST00000546869 CMC2Q9NRP2 79 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 ENOPH1Q9UHY7 261 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 ST6GALNAC2Q9UJ37 374 aa12.58□□□□□ -0.4
DDX54-203ENST00000546869 COA3Q9Y2R0 106 aaPredicted RBP12.58□□□□□ -0.4
DDX54-203ENST00000546869 PRR14LQ5THK1 2151 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 IGLV1-36A0A0B4J1U3 117 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 DCTN6O00399 190 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 IFNGP01579 166 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 HMGN1P05114 100 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 CENPAP49450 140 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 SLC25A1P53007 311 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 CRISP1P54107 249 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 GLO1Q04760 184 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 PIGFQ07326 219 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 GINS1Q14691 196 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 PGGHGQ32M88 737 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 SLC35F1Q5T1Q4 408 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 OR4F15Q8NGB8 312 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 IGFBPL1Q8WX77 278 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 AKAP1Q92667 903 aaKnown RBP eCLIP12.57□□□□□ -0.4
DDX54-203ENST00000546869 FBXW5Q969U6 566 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms