RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TEX13CA0A0J9YWL9 993 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 A1L4Q6 167 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 A6NIZ1 184 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 OR6C65A6NJZ3 312 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF726A6NNF4 738 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 A8MXE2 369 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF587BE7ETH6 402 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 H3BN98 237 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 PDLIM1O00151 329 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 XKRYO14609 159 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 EI24O14681 340 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 PRODHO43272 600 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 CNOT4O95628 575 aaKnown RBP5.57□□□□□ -1.52
PRKDC-211ENST00000546304 PPP1R3DO95685 299 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 BAG2O95816 211 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 BCL10O95999 233 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 PGA4P0DJD7 388 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 PGA3P0DJD8 388 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 NR2C1P13056 603 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 APEHP13798 732 aaKnown RBP5.57□□□□□ -1.52
PRKDC-211ENST00000546304 PRKACGP22612 351 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 IGFBP5P24593 272 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 SDHAP31040 664 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 CSNK1A1P48729 337 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 RPS6KA3P51812 740 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 CTXN1P60606 82 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 RAP1BP61224 184 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 RPL27P61353 136 aaKnown RBP5.57□□□□□ -1.52
PRKDC-211ENST00000546304 RAP1AP62834 184 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ERVK-25P63136 954 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 PPP2R2BQ00005 443 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 SORDQ00796 357 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 LGALS3BPQ08380 585 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 CD47Q08722 323 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 COX10Q12887 443 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 CAMK2DQ13557 499 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 MESTQ5EB52 335 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ARMC4Q5T2S8 1044 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 TSPO2Q5TGU0 170 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 FBXW9Q5XUX1 488 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 STEAP3Q658P3 488 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 GPR139Q6DWJ6 353 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF474Q6S9Z5 364 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-211ENST00000546304 NHLRC1Q6VVB1 395 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 DPY19L2P2Q6ZN68 376 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 FAM122BQ7Z309 247 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ADCK1Q86TW2 530 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 WDFY1Q8IWB7 410 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 GABRG1Q8N1C3 465 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 UBE2J2Q8N2K1 259 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 PARP8Q8N3A8 854 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 GPR137CQ8N3F9 429 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF610Q8N9Z0 462 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 POMGNT2Q8NAT1 580 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 OR2T33Q8NG76 320 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 OR6X1Q8NH79 312 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 RNASE6Q93091 150 aaKnown RBP5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF566Q969W8 418 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 RASD2Q96D21 266 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 LRRC46Q96FV0 321 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 SLC25A44Q96H78 314 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-211ENST00000546304 TXNDC15Q96J42 360 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 SAMD8Q96LT4 415 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 CIB1Q99828 191 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 RBM4BQ9BQ04 359 aaKnown RBP5.57□□□□□ -1.52
PRKDC-211ENST00000546304 IFT27Q9BW83 186 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 RBM4Q9BWF3 364 aaKnown RBP5.57□□□□□ -1.52
PRKDC-211ENST00000546304 OSBPL10Q9BXB5 764 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ULBP2Q9BZM5 246 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 LINC00470Q9BZP3 86 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 TXNIPQ9H3M7 391 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 KCNJ16Q9NPI9 418 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 NRIP3Q9NQ35 241 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 PLSCR4Q9NRQ2 329 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 SLC7A10Q9NS82 523 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 KRT84Q9NSB2 600 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ASB6Q9NWX5 421 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 IL20Q9NYY1 176 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 POFUT2Q9Y2G5 429 aa5.57□□□□□ -1.52
PRKDC-211ENST00000546304 KLF2Q9Y5W3 355 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ANKRD17O75179 2603 aaKnown RBP5.57□□□□□ -1.52
PRKDC-211ENST00000546304 ITPR2Q14571 2701 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 SETXQ7Z333 2677 aaKnown RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 LRBAP50851 2863 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 POLQO75417 2590 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 CENPBD1B2RD01 187 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 H7C1C5 153 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 M0R3G1 203 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 BHLHE40O14503 412 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 SOCS2O14508 198 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ARPC3O15145 178 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 PTP4A3O75365 173 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 UPK3AO75631 287 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 TRMUO75648 421 aaKnown RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 LYZL6O75951 148 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 KRT33AO76009 404 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 TXNDC12O95881 172 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ALPLP05186 524 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ITGA5P08648 1049 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms