RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 TMEM127O75204 238 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 RAB40ALP0C0E4 278 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 LIFP15018 202 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 KLK2P20151 261 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 EIF1P41567 113 aaKnown RBP12.66□□□□□ -0.38
LDB3-207ENST00000542786 SSR4P51571 173 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 CLDN6P56747 220 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 OR2B6P58173 313 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 RPS18P62269 152 aaKnown RBP12.66□□□□□ -0.38
LDB3-207ENST00000542786 ADAM8P78325 824 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 CHAF1BQ13112 559 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 STPG1Q5TH74 334 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 ZNF468Q5VIY5 522 aaPredicted RBP12.66□□□□□ -0.38
LDB3-207ENST00000542786 STAC2Q6ZMT1 411 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 RPS19BP1Q86WX3 136 aaKnown RBP12.66□□□□□ -0.38
LDB3-207ENST00000542786 DTX3Q8N9I9 347 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 OR51A4Q8NGJ6 313 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 OR52N5Q8NH56 324 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 SLC25A43Q8WUT9 341 aaPredicted RBP12.66□□□□□ -0.38
LDB3-207ENST00000542786 SLC25A38Q96DW6 304 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 CMTM3Q96MX0 182 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 DDA1Q9BW61 102 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 TMEM185BQ9H7F4 350 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 RBFOX1Q9NWB1 397 aaKnown RBP12.66□□□□□ -0.38
LDB3-207ENST00000542786 PISDQ9UG56 409 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 TCFL5Q9UL49 500 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 TRAV8-7A0A075B6U6 113 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 LOC102725191A0A1B0GVB3 256 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 A0A1W2PNR3 127 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 TRABD2BA6NFA1 517 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 RAMP1O60894 148 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 KHDRBS3O75525 346 aaKnown RBP12.65□□□□□ -0.38
LDB3-207ENST00000542786 RAF1P04049 648 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 HRGP04196 525 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 ADRB1P08588 477 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 TCEA1P23193 301 aaKnown RBP12.65□□□□□ -0.38
LDB3-207ENST00000542786 MAPK3P27361 379 aaPredicted RBP12.65□□□□□ -0.38
LDB3-207ENST00000542786 AVPR2P30518 371 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 BIDP55957 195 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 SF3A2Q15428 464 aaKnown RBP12.65□□□□□ -0.38
LDB3-207ENST00000542786 ASPHD2Q6ICH7 369 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 PYHIN1Q6K0P9 492 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 DNM1P34Q6PK57 102 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 C6orf15Q6UXA7 325 aaPredicted RBP12.65□□□□□ -0.38
LDB3-207ENST00000542786 MDGA2Q7Z553 956 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.65□□□□□ -0.38
LDB3-207ENST00000542786 CATSPERDQ86XM0 798 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 RAB43Q86YS6 212 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 DUSP18Q8NEJ0 188 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 BRD7Q9NPI1 651 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 PADI1Q9ULC6 663 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 HDGFL3Q9Y3E1 203 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 VPS13AQ96RL7 3174 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 EML6Q6ZMW3 1958 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 ARPC4-TTLL3A0A0A6YYG9 625 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 LYRM1O43325 122 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 ZIC3O60481 467 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 OPN1LWP04000 364 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 FREM3P0C091 2139 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 CFPP27918 469 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 TALDO1P37837 337 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 SOX2P48431 317 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 TPTEP56180 551 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 EIF2B1Q14232 305 aaKnown RBP12.65□□□□□ -0.38
LDB3-207ENST00000542786 H3F3CQ6NXT2 135 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 RAB11FIP2Q7L804 512 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 GPR148Q8TDV2 347 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 MIB2Q96AX9 1013 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 LIN37Q96GY3 246 aaPredicted RBP12.65□□□□□ -0.38
LDB3-207ENST00000542786 OR5B2Q96R09 309 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 TAAR9Q96RI9 348 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 ZPBPQ9BS86 351 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 PTGES2Q9H7Z7 377 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 RYDENQ9NUL5 291 aaKnown RBP12.65□□□□□ -0.38
LDB3-207ENST00000542786 AKAP7Q9P0M2 348 aaPredicted RBP12.65□□□□□ -0.38
LDB3-207ENST00000542786 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 SLC22A13Q9Y226 551 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 LRP12Q9Y561 859 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 V9GY05 133 aa12.65□□□□□ -0.38
LDB3-207ENST00000542786 AQP7P3A6NL99 342 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 C9orf172C9J069 976 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 FAM47E-STBD1D6RA91 191 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 AQP8O94778 261 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 UBL3O95164 117 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 CD63P08962 238 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 PGA4P0DJD7 388 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 PGA3P0DJD8 388 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 FKBP2P26885 142 aaKnown RBP12.64□□□□□ -0.39
LDB3-207ENST00000542786 NR4A2P43354 598 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 UBE2NLQ5JXB2 153 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 HES5Q5TA89 166 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 AKAP14Q86UN6 197 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 NAXDQ8IW45 347 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 CMTM4Q8IZR5 234 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 ZNF676Q8N7Q3 588 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 C19orf18Q8NEA5 215 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 ADAMTS14Q8WXS8 1223 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 EMC6Q9BV81 110 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 STRADBQ9C0K7 418 aa12.64□□□□□ -0.39
LDB3-207ENST00000542786 COMMD4Q9H0A8 199 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms