RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CXCR4P61073 352 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ABCE1P61221 599 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 YWHAGP61981 247 aaKnown RBP eCLIP2.68□□□□□ -1.98
USP28-210ENST00000542033 RBX1P62877 108 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 PPIAP62937 165 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 SLC7A9P82251 487 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 MRPS22P82650 360 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 TNFRSF17Q02223 184 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 SEMG2Q02383 582 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 SLAQ13239 276 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 SRSF5Q13243 272 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 BIKQ13323 160 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 NFATC2Q13469 925 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 PEX6Q13608 980 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 KLF5Q13887 457 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 GRB7Q14451 532 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 IRF4Q15306 451 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 TMED2Q15363 201 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 P2RY14Q15391 338 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 HAGHQ16775 308 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 TATDN3Q17R31 274 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 AKIRIN2Q53H80 203 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ACTBL2Q562R1 376 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 OR2B11Q5JQS5 317 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ACER2Q5QJU3 275 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ATAD3CQ5T2N8 411 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 OGFRL1Q5TC84 451 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 SLC39A4Q6P5W5 647 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 CD300LGQ6UXG3 332 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 LRRN1Q6UXK5 716 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 WASH2PQ6VEQ5 465 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 DPY19L2P2Q6ZN68 376 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 PAQR9Q6ZVX9 377 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 C16orf62Q7Z3J2 963 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ERASQ7Z444 233 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ABHD12BQ7Z5M8 362 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 GALNT10Q86SR1 603 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 RANBP3LQ86VV4 465 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 SLC22A15Q8IZD6 547 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 RDH10Q8IZV5 341 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 PQLC3Q8N755 202 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 GVQW1Q8N7I0 195 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 NECAB1Q8N987 351 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 GDPD1Q8N9F7 314 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 Q8N9G6 341 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 Q8NBF4 154 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 LINC00301Q8NCQ3 95 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 OR5D18Q8NGL1 313 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 OR5M9Q8NGP3 310 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 RAB2BQ8WUD1 216 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 RPL3LQ92901 407 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 PSMG2Q969U7 264 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 MCHR2Q969V1 340 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 MRPL24Q96A35 216 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 PNPLA2Q96AD5 504 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 L3HYPDHQ96EM0 354 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 CNRIP1Q96F85 164 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 ATXN7L3BQ96GX2 97 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 SH3YL1Q96HL8 342 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 C14orf144Q96I85 54 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 RNF170Q96K19 258 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 FAM218AQ96MZ4 157 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 PLEKHF1Q96S99 279 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 LGMNQ99538 433 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 EBNA1BP2Q99848 306 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 OVOL2Q9BRP0 275 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ALG12Q9BV10 488 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 TM6SF2Q9BZW4 377 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 NMUR2Q9GZQ4 415 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ASB7Q9H672 318 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 KIR3DX1Q9H7L2 352 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 POLD4Q9HCU8 107 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ABCB10Q9NRK6 738 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 NLGN3Q9NZ94 848 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 MYEF2Q9P2K5 600 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 KIF25Q9UIL4 384 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 KLHL21Q9UJP4 597 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 SCP2D1Q9UJQ7 156 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 PURGQ9UJV8 347 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 B9D1Q9UPM9 204 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 CA5BQ9Y2D0 317 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 STARD10Q9Y365 291 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 MMACHCQ9Y4U1 282 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 AP4B1Q9Y6B7 739 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ATP10BO94823 1461 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 A2MP01023 1474 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ERVK-7P63135 1459 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ZC3H13Q5T200 1668 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 ARAP3Q8WWN8 1544 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ZFYVE9O95405 1425 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 TROQ12816 1431 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 NSD3Q9BZ95 1437 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 A0A1B0GUL6 1792 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 MAST1Q9Y2H9 1570 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 COL2A1P02458 1487 aaPredicted RBP2.67□□□□□ -1.98
USP28-210ENST00000542033 CNTNAP1P78357 1384 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 SLC5A10A0PJK1 596 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 BTBD17A6NE02 478 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 GABRR3A8MPY1 467 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ANHXE9PGG2 379 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms