RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 A0A1B0GTH9 108 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 DCDC2BA2VCK2 349 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 J3QRE1 110 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 GOSR2O14653 212 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 FGF2P09038 288 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 H2BFSP57053 126 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 HAGHLQ6PII5 290 aaPredicted RBP12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 OVCH2Q7RTZ1 564 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 SLC35F2Q8IXU6 374 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 CMTM4Q8IZR5 234 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 RBM18Q96H35 190 aaKnown RBP12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 CNN2Q99439 309 aaKnown RBP12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 IKZF2Q9UKS7 526 aa12.98□□□□□ -0.33
SFSWAP-210ENST00000541286 RAB19A4D1S5 217 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 TLCD2A6NGC4 264 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 SGCEO43556 437 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 GPR75O95800 540 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 PSMB1P20618 241 aaKnown RBP12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 EFNA3P52797 238 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 SEC61A1P61619 476 aaKnown RBP12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 GUCA2BQ16661 112 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 PWWP2BQ6NUJ5 590 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 SAMD14Q8IZD0 417 aaPredicted RBP12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 ZDHHC12Q96GR4 267 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNF230Q9UIE0 474 aaPredicted RBP12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 TVP23AA6NH52 213 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 DISC1C4P0D8 188 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 ARL6IP5O75915 188 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 AKR7A3O95154 331 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 FBXO45P0C2W1 286 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 MST1P26927 711 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 CCR9P51686 369 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 TAS2R43P59537 309 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 RPS15P62841 145 aaKnown RBP12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 SWI5Q1ZZU3 235 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 VWA2Q5GFL6 755 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 SLC22A8Q8TCC7 542 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 CPNE2Q96FN4 548 aaPredicted RBP12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 TSNAXQ99598 290 aaKnown RBP12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 PDE7BQ9NP56 450 aa12.97□□□□□ -0.33
SFSWAP-210ENST00000541286 UBL3O95164 117 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 MAS1P04201 325 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 OR8G3PP0DMU2 310 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 LIPCP11150 499 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 APEHP13798 732 aaKnown RBP12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 BTG2P78543 158 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNHIT3Q15649 155 aaPredicted RBP12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 HFEQ30201 348 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 OR7E24Q6IFN5 339 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 KIRREL2Q6UWL6 708 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 PLXDC1Q8IUK5 500 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 RNF113BQ8IZP6 322 aaKnown RBP12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 OR8S1Q8NH09 359 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 SCARB1Q8WTV0 552 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 MMABQ96EY8 250 aaPredicted RBP12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 ING1Q9UK53 422 aaPredicted RBP12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 DTX4Q9Y2E6 619 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNF749O43361 778 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 F13BP05160 661 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 THBS1P07996 1170 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 PTBP1P26599 531 aaKnown RBP eCLIP12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 GABRA4P48169 554 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 FGL1Q08830 312 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 GK2Q14410 553 aaPredicted RBP12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 CSRP2Q16527 193 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNF660Q6AZW8 331 aaPredicted RBP12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 DMKNQ6E0U4 476 aaPredicted RBP12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 FGD2Q7Z6J4 655 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 TPRA1Q86W33 373 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 ZNF75AQ96N20 296 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 SPSB2Q99619 263 aa12.96□□□□□ -0.33
SFSWAP-210ENST00000541286 TNFSF14O43557 240 aa12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 STARP49675 285 aa12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 PITPNAQ00169 270 aa12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 FLI1Q01543 452 aaPredicted RBP12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 BDH1Q02338 343 aa12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 YOD1Q5VVQ6 348 aaPredicted RBP12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 TMPRSS11FQ6ZWK6 438 aa12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 SLITRK4Q8IW52 837 aa12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 LOXL4Q96JB6 756 aa12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 PELOQ9BRX2 385 aaKnown RBP12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 MKKSQ9NPJ1 570 aaPredicted RBP12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 EXOSC3Q9NQT5 275 aaKnown RBP12.96□□□□□ -0.34
SFSWAP-210ENST00000541286 MED12Q93074 2177 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 EFCAB7A8K855 629 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 FOXS1O43638 330 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 CSTAP01040 98 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 SPP1P10451 314 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 GABRA1P14867 456 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 TSFMP43897 325 aaKnown RBP12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 MEOX2P50222 304 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 HSD11B2P80365 405 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 PLAURQ03405 335 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 CDK5R1Q15078 307 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 TRIP6Q15654 476 aaKnown RBP12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 ARHGAP11AQ6P4F7 1023 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 LEG1Q6P5S2 330 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 TMEM71Q6P5X7 295 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 BCL2L14Q9BZR8 327 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 ACTR6Q9GZN1 396 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms