RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	DGCR6	Q14129	220 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.73	□□□□□ -0.53
POLE-215	ENST00000540987	TMEM249	Q2WGJ8	235 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	SLC36A2	Q495M3	483 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	MEST	Q5EB52	335 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	FAM205BP	Q63HN1	556 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	FOXL2NB	Q6ZUU3	175 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	FAM122B	Q7Z309	247 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	DPPA2	Q7Z7J5	298 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	PRIMA1	Q86XR5	153 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	LRRC37B	Q96QE4	947 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	TPK1	Q9H3S4	243 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	GORASP2	Q9H8Y8	452 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	RNF121	Q9H920	327 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	DYNLRB1	Q9NP97	96 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	SLC7A8	Q9UHI5	535 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	FZR1	Q9UM11	496 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	TMEM5	Q9Y2B1	443 aa		11.73	□□□□□ -0.53
POLE-215	ENST00000540987	SH3PXD2B	A1X283	911 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	DCTN3	O75935	186 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	ADRA2A	P08913	450 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	FAM157B	P0CG42	384 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	ZNF32	P17041	273 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	APEX1	P27695	318 aa	Known RBP	11.72	□□□□□ -0.53
POLE-215	ENST00000540987	OMP	P47874	163 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	RPS23	P62266	143 aa	Known RBP	11.72	□□□□□ -0.53
POLE-215	ENST00000540987	PPP2R2B	Q00005	443 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	GALK2	Q01415	458 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	CARTPT	Q16568	116 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	ANKDD1A	Q495B1	522 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	ZBED5	Q49AG3	693 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	PABPC1L2A	Q5JQF8	200 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	SAMD4B	Q5PRF9	694 aa	Known RBP	11.72	□□□□□ -0.53
POLE-215	ENST00000540987	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.72	□□□□□ -0.53
POLE-215	ENST00000540987	THSD4	Q6ZMP0	1018 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	DEFB107A	Q8IZN7	70 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	ARIH2OS	Q8N7S6	290 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	CPEB3	Q8NE35	698 aa	Known RBP	11.72	□□□□□ -0.53
POLE-215	ENST00000540987	RSRC1	Q96IZ7	334 aa	Known RBP	11.72	□□□□□ -0.53
POLE-215	ENST00000540987		Q96M85	177 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	CDRT15	Q96T59	188 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	GPA33	Q99795	319 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	OR51B6	Q9H340	312 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	SIAE	Q9HAT2	523 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	CDH20	Q9HBT6	801 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	ADAM21	Q9UKJ8	722 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	SIGLEC7	Q9Y286	467 aa		11.72	□□□□□ -0.53
POLE-215	ENST00000540987	IGHV4-61	A0A0C4DH41	118 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987		A6NIZ1	184 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	IMPA2	O14732	288 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	SNAP29	O95721	258 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	TP53	P04637	393 aa	Predicted RBP	11.71	□□□□□ -0.53
POLE-215	ENST00000540987	SCG5	P05408	212 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	CD14	P08571	375 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	IGHV4-31	P0DP07	118 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	NR2C1	P13056	603 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	ZNF16	P17020	682 aa	Predicted RBP	11.71	□□□□□ -0.53
POLE-215	ENST00000540987	ATP6V1B2	P21281	511 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	ALDH3B1	P43353	468 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	NR4A2	P43354	598 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	RAP1B	P61224	184 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	RAP1A	P62834	184 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	ENDOG	Q14249	297 aa	Known RBP	11.71	□□□□□ -0.53
POLE-215	ENST00000540987	GGTLC2	Q14390	218 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	SGCA	Q16586	387 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	THEM4	Q5T1C6	240 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	C6orf52	Q5T4I8	152 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	FITM2	Q8N6M3	262 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	OR52J3	Q8NH60	311 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	AKR7L	Q8NHP1	331 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	RASD2	Q96D21	266 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	PYURF	Q96I23	114 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	NSMCE2	Q96MF7	247 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	ZNF570	Q96NI8	536 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	FOXN4	Q96NZ1	517 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	CCT8L2	Q96SF2	557 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	GPX7	Q96SL4	187 aa	Predicted RBP	11.71	□□□□□ -0.53
POLE-215	ENST00000540987	PIMREG	Q9BSJ6	248 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	BPESC1	Q9GZL8	116 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	RAB1B	Q9H0U4	201 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	WNT5B	Q9H1J7	359 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	C1orf198	Q9H425	327 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.71	□□□□□ -0.53
POLE-215	ENST00000540987	YAE1D1	Q9NRH1	226 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	FBXO9	Q9UK97	447 aa	Predicted RBP	11.71	□□□□□ -0.53
POLE-215	ENST00000540987	FAM32A	Q9Y421	112 aa	Known RBP	11.71	□□□□□ -0.53
POLE-215	ENST00000540987	SPEF1	Q9Y4P9	236 aa		11.71	□□□□□ -0.53
POLE-215	ENST00000540987	TEX13C	A0A0J9YWL9	993 aa		11.7	□□□□□ -0.54
POLE-215	ENST00000540987		A0A1W2PPL8	197 aa		11.7	□□□□□ -0.54
POLE-215	ENST00000540987	LOC390937	A0A1W2PQ73	354 aa		11.7	□□□□□ -0.54
POLE-215	ENST00000540987	SLC22A23	A1A5C7	686 aa		11.7	□□□□□ -0.54
POLE-215	ENST00000540987	VSTM5	A8MXK1	200 aa		11.7	□□□□□ -0.54
POLE-215	ENST00000540987		M0R233	179 aa		11.7	□□□□□ -0.54
POLE-215	ENST00000540987	NDUFS8	O00217	210 aa		11.7	□□□□□ -0.54
POLE-215	ENST00000540987	SYNGR3	O43761	229 aa		11.7	□□□□□ -0.54
POLE-215	ENST00000540987	TLX2	O43763	284 aa	Predicted RBP	11.7	□□□□□ -0.54
POLE-215	ENST00000540987	PTP4A3	O75365	173 aa		11.7	□□□□□ -0.54
POLE-215	ENST00000540987	CRLF1	O75462	422 aa		11.7	□□□□□ -0.54
POLE-215	ENST00000540987	GMNN	O75496	209 aa		11.7	□□□□□ -0.54
POLE-215	ENST00000540987	NDUFB2	O95178	105 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms