RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 GSX2Q9BZM3 304 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 OR52D1Q9H346 318 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 RERGLQ9H628 205 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 DENND2DQ9H6A0 471 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-215ENST00000540904 SIAEQ9HAT2 523 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 CA10Q9NS85 328 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF701Q9NV72 531 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-215ENST00000540904 SLC7A8Q9UHI5 535 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 UGT2A1Q9Y4X1 527 aa8.01□□□□□ -1.13
SNHG1-215ENST00000540904 A0A1W2PPL8 197 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 OVOL3O00110 214 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 GNGT2O14610 69 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 IMPA2O14732 288 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 AHCYL1O43865 530 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 TMCC2O75069 709 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 CST1P01037 141 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 GASTP01350 101 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 NPR2P20594 1047 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 NOS3P29474 1203 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 SLC6A6P31641 620 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 APOBEC3AP31941 199 aaPredicted RBP8□□□□□ -1.13
SNHG1-215ENST00000540904 ATP5J2P56134 94 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 MRPS34P82930 218 aaKnown RBP8□□□□□ -1.13
SNHG1-215ENST00000540904 HGFACQ04756 655 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 TSPAN31Q12999 210 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 ETFDHQ16134 617 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 MICAQ29983 383 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 RFX4Q33E94 735 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 SLC36A2Q495M3 483 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 Q5PR19 223 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 CLEC12AQ5QGZ9 265 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 SHEQ5VZ18 495 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF770Q6IQ21 691 aaPredicted RBP8□□□□□ -1.13
SNHG1-215ENST00000540904 KRT80Q6KB66 452 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 TMEM53Q6P2H8 277 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF620Q6ZNG0 422 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 YTHDF3Q7Z739 585 aaKnown RBP8□□□□□ -1.13
SNHG1-215ENST00000540904 DPPA2Q7Z7J5 298 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 LRRC75A-AS1Q8N1F1 130 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 LINC00471Q8N535 108 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 WFDC11Q8NEX6 87 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 IL17RDQ8NFM7 739 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 OR4F15Q8NGB8 312 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 NABP1Q96AH0 204 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 TRMT61AQ96FX7 289 aaKnown RBP8□□□□□ -1.13
SNHG1-215ENST00000540904 SAMD8Q96LT4 415 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 FOXN4Q96NZ1 517 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 IFT27Q9BW83 186 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 SYT4Q9H2B2 425 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 KCNN2Q9H2S1 579 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 EGLN3Q9H6Z9 239 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 CCNB1IP1Q9NPC3 277 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 CBLN4Q9NTU7 201 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 FBXL3Q9UKT7 428 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 MYO9AB2RTY4 2548 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 ROS1P08922 2347 aa8□□□□□ -1.13
SNHG1-215ENST00000540904 TCRBV3S1A0A5B6 114 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 MGRN1O60291 552 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 SLC16A7O60669 478 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 TXNDC12O95881 172 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 SERPINA5P05154 406 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 OR4A8P0C604 315 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 APEHP13798 732 aaKnown RBP7.99□□□□□ -1.13
SNHG1-215ENST00000540904 PAX1P15863 534 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 CTLA4P16410 223 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 HOXB6P17509 224 aaKnown RBP7.99□□□□□ -1.13
SNHG1-215ENST00000540904 LAP3P28838 519 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 SERPINF1P36955 418 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 CDKN2AP42771 156 aaKnown RBP7.99□□□□□ -1.13
SNHG1-215ENST00000540904 HSF2Q03933 536 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 PLP2Q04941 152 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 DAG1Q14118 895 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 ADIPOQQ15848 244 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 SLC35F1Q5T1Q4 408 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 FAM27BQ5VT28 67 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 PTCHD4Q6ZW05 846 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 ADCK1Q86TW2 530 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 JAZF1Q86VZ6 243 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 TGIF2LYQ8IUE0 185 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 KRTAP1-3Q8IUG1 177 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF584Q8IVC4 421 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 SLC30A7Q8NEW0 376 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 NUP37Q8NFH4 326 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 OR10G2Q8NGC3 310 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 OR52L1Q8NGH7 329 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 FBXO17Q96EF6 278 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 CACNG6Q9BXT2 260 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 GRIP2Q9C0E4 1043 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 LRMDAQ9H2I8 198 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 YY1AP1Q9H869 796 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 CDH10Q9Y6N8 788 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 CADP27708 2225 aa7.99□□□□□ -1.13
SNHG1-215ENST00000540904 RAI1Q7Z5J4 1906 aaPredicted RBP7.99□□□□□ -1.13
SNHG1-215ENST00000540904 PRRC2AP48634 2157 aaKnown RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 IQCMA0A1B0GVH7 501 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 ARPC3O15145 178 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 NDUFS7O75251 213 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 FKBP6O75344 327 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 E2F6O75461 281 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 KHDRBS3O75525 346 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms