RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PATZ1Q9HBE1 687 aaKnown RBP3.85□□□□□ -1.79
SNHG1-214ENST00000540865 MID1IP1Q9NPA3 183 aa3.85□□□□□ -1.79
SNHG1-214ENST00000540865 TNFRSF19Q9NS68 423 aa3.85□□□□□ -1.79
SNHG1-214ENST00000540865 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-214ENST00000540865 EXD2Q9NVH0 621 aa3.85□□□□□ -1.79
SNHG1-214ENST00000540865 C1orf109Q9NX04 203 aa3.85□□□□□ -1.79
SNHG1-214ENST00000540865 OR5V1Q9UGF6 321 aa3.85□□□□□ -1.79
SNHG1-214ENST00000540865 ATP6V1HQ9UI12 483 aa3.85□□□□□ -1.79
SNHG1-214ENST00000540865 SLC45A2Q9UMX9 530 aa3.85□□□□□ -1.79
SNHG1-214ENST00000540865 PPP2R2CQ9Y2T4 447 aa3.85□□□□□ -1.79
SNHG1-214ENST00000540865 TMED5Q9Y3A6 229 aa3.85□□□□□ -1.79
SNHG1-214ENST00000540865 NPTNQ9Y639 398 aa3.85□□□□□ -1.79
SNHG1-214ENST00000540865 HUWE1Q7Z6Z7 4374 aaKnown RBP3.85□□□□□ -1.79
SNHG1-214ENST00000540865 TENM2Q9NT68 2774 aa3.85□□□□□ -1.79
SNHG1-214ENST00000540865 STAB2Q8WWQ8 2551 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 TRAV40A0A0B4J280 105 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 LOC102725191A0A1B0GVB3 256 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 A8MVM7 634 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 F5H0A9 414 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-214ENST00000540865 F2RL2O00254 374 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 SLC28A1O00337 649 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 AP3D1O14617 1153 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 TM9SF1O15321 606 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 XPNPEP2O43895 674 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 GPR137BO60478 399 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 CRCPO75575 148 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 UBL3O95164 117 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 IGHV3-13P01766 116 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 IGHV2-70P01814 119 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 INHBAP08476 426 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 MELTFP08582 738 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 SBK2P0C263 348 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 UQCRBP14927 111 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 MATN1P21941 496 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 CXCR1P25024 350 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 HPCAL1P37235 193 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 PTDSS1P48651 473 aaKnown RBP3.84□□□□□ -1.79
SNHG1-214ENST00000540865 SERPINB9P50453 376 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF81P51508 661 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 CLDN17P56750 224 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 NAA20P61599 178 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 PAX2Q02962 417 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 PIGFQ07326 219 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 CAMK2DQ13557 499 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 RAB39AQ14964 217 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 PDCD4Q53EL6 469 aaKnown RBP3.84□□□□□ -1.79
SNHG1-214ENST00000540865 ESCO2Q56NI9 601 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 RABL3Q5HYI8 236 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 IGFL4Q6B9Z1 124 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 TYW3Q6IPR3 259 aaKnown RBP3.84□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF813Q6ZN06 617 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 C16orf62Q7Z3J2 963 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 LCA5Q86VQ0 697 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 LRRC28Q86X40 367 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-214ENST00000540865 SNX32Q86XE0 403 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 RNF130Q86XS8 419 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 DDIASQ8IXT1 998 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 C20orf196Q8IYI0 205 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 TMEM123Q8N131 208 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 SLC35F6Q8N357 371 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 CLHC1Q8NHS4 586 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 TBC1D15Q8TC07 691 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 MIPOL1Q8TD10 442 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 CNOT9Q92600 299 aaKnown RBP3.84□□□□□ -1.79
SNHG1-214ENST00000540865 SGCDQ92629 289 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 LRR1Q96L50 414 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 OXGR1Q96P68 337 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 TSPAN32Q96QS1 320 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 OR2M2Q96R28 347 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 C1orf43Q9BWL3 253 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 BCL2L14Q9BZR8 327 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 DPH5Q9H2P9 285 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 C1orf198Q9H425 327 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 NANOGQ9H9S0 305 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 FN3KRPQ9HA64 309 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 A4GALTQ9NPC4 353 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 ATAD3AQ9NVI7 634 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 ADPRHL2Q9NX46 363 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 BAIAP2L1Q9UHR4 511 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 POFUT2Q9Y2G5 429 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 LRCH1Q9Y2L9 728 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 WDR45Q9Y484 360 aa3.84□□□□□ -1.79
SNHG1-214ENST00000540865 A0A096LPI6 279 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 IGHV2-70DA0A0C4DH43 119 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 CFAP73A6NFT4 308 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 CLDN24A6NM45 220 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 FTCDNL1E5RQL4 147 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 H0YL77 283 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 M0R3G1 203 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 TNFRSF13BO14836 293 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-214ENST00000540865 SPRY3O43610 288 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 FZD7O75084 574 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 NPIPB7O75200 414 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 ENTPD5O75356 428 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 LYPLA1O75608 230 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-214ENST00000540865 TSPAN9O75954 239 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 MFN2O95140 757 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 TGDSO95455 350 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 PPP1R3DO95685 299 aa3.83□□□□□ -1.8
SNHG1-214ENST00000540865 SNAP29O95721 258 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms