RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 MRASO14807 208 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 TRMUO75648 421 aaKnown RBP13.1□□□□□ -0.31
UBE3B-211ENST00000539843 LYPD3O95274 346 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 GAAP10253 952 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 CCL2P13500 99 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 ZNF250P15622 560 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 AQP2P41181 271 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 GDI2P50395 445 aaKnown RBP13.1□□□□□ -0.31
UBE3B-211ENST00000539843 UGT2B15P54855 530 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 PCBD1P61457 104 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 MRPS34P82930 218 aaKnown RBP13.1□□□□□ -0.31
UBE3B-211ENST00000539843 HIST3H3Q16695 136 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 HFEQ30201 348 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 ZNF718Q3SXZ3 478 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 ALG10Q5BKT4 473 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 ZMAT1Q5H9K5 638 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 C10orf128Q5T292 105 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 FAM205BPQ63HN1 556 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 ARL9Q6T311 187 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 WDFY1Q8IWB7 410 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 OR1J1Q8NGS3 322 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 PFN4Q8NHR9 129 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 FGFBP3Q8TAT2 258 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 ZNF418Q8TF45 676 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-211ENST00000539843 TMEM255BQ8WV15 326 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 PRSS27Q9BQR3 290 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 EGLN1Q9GZT9 426 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 METTL17Q9H7H0 456 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-211ENST00000539843 SAP30LQ9HAJ7 183 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 LPAR2Q9HBW0 351 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 MEPEQ9NQ76 525 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-211ENST00000539843 CYSLTR2Q9NS75 346 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 AP3M1Q9Y2T2 418 aa13.1□□□□□ -0.31
UBE3B-211ENST00000539843 IGHV1-69-2A0A0G2JMI3 117 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 CDC14BO60729 498 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 STOMP27105 288 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 ARFIP2P53365 341 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 CCL8P80075 99 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 SLC3A1Q07837 685 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 PIN1Q13526 163 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-211ENST00000539843 SGCAQ16586 387 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 RABL3Q5HYI8 236 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 TREML1Q86YW5 311 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 NKAIN4Q8IVV8 208 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 RAB1CQ92928 201 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 ELMOD3Q96FG2 381 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 TPD52L3Q96J77 140 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 LRRC37BQ96QE4 947 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 ALG12Q9BV10 488 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 MRPL13Q9BYD1 178 aaKnown RBP13.09□□□□□ -0.31
UBE3B-211ENST00000539843 TXNIPQ9H3M7 391 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 TREM2Q9NZC2 230 aa13.09□□□□□ -0.31
UBE3B-211ENST00000539843 CGGBP1Q9UFW8 167 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-211ENST00000539843 NCR1O76036 304 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 CLPTM1O96005 669 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 PNPP00491 289 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 ITGA2P17301 1181 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 LIPAP38571 399 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 CRYBB2P43320 205 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 MAGEB1P43366 347 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 ZNF81P51508 661 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 ARHGDIAP52565 204 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 SRSF2Q01130 221 aaKnown RBP13.08□□□□□ -0.32
UBE3B-211ENST00000539843 TOP3AQ13472 1001 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-211ENST00000539843 ANKDD1AQ495B1 522 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 PABPC1L2AQ5JQF8 200 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 THEM4Q5T1C6 240 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 ACSM5Q6NUN0 579 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 FAHD2BQ6P2I3 314 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-211ENST00000539843 C12orf54Q6X4T0 127 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 ARPINQ7Z6K5 226 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 PEG10Q86TG7 708 aaKnown RBP13.08□□□□□ -0.32
UBE3B-211ENST00000539843 OR2T12Q8NG77 320 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 ZFAND2BQ8WV99 257 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 LIPHQ8WWY8 451 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 NSMAFQ92636 917 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 YIPF5Q969M3 257 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 FAHD2AQ96GK7 314 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 PRRC1Q96M27 445 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 JMJD8Q96S16 334 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 SEPHS2Q99611 448 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 ELOVL3Q9HB03 270 aa13.08□□□□□ -0.32
UBE3B-211ENST00000539843 A0A0G2JMP0 313 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 A0A0X1KG70 313 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 C5orf49A4QMS7 147 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 A6NIZ1 184 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 FAM220BPB1ANY3 271 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 FBP2O00757 339 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 SHOX2O60902 331 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-211ENST00000539843 SLC2A10O95528 541 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 IFI30P13284 250 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 TNFRSF1BP20333 461 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 OR1E2P47887 323 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 GZMMP51124 257 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 ZNF133P52736 654 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-211ENST00000539843 RAP1BP61224 184 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 RAP1AP62834 184 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 MVKQ03426 396 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 GLO1Q04760 184 aa13.07□□□□□ -0.32
UBE3B-211ENST00000539843 RUNX1T1Q06455 604 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms