RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 FOXRED1Q96CU9 486 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-209ENST00000539584 SEH1LQ96EE3 360 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 SYT4Q9H2B2 425 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 ELOVL3Q9HB03 270 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 FAM60AQ9NP50 221 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 COMMD9Q9P000 198 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-209ENST00000539584 KANTRA0A1W2PQU2 76 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 A8MUA0 341 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 ST6GAL1P15907 406 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 HTR2CP28335 458 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 MEP1BQ16820 701 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 PHF19Q5T6S3 580 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 TMEM225Q6GV28 225 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 RAB12Q6IQ22 244 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 FAHD2BQ6P2I3 314 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-209ENST00000539584 MAMDC2Q7Z304 686 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-209ENST00000539584 LSRQ86X29 649 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-209ENST00000539584 AVL9Q8NBF6 648 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 OR51A4Q8NGJ6 313 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 OR10AC1Q8NH08 325 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 ZNF563Q8TA94 476 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 SLC25A28Q96A46 364 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 WDR89Q96FK6 387 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-209ENST00000539584 FAHD2AQ96GK7 314 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 TCTN2Q96GX1 697 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 SLC46A1Q96NT5 459 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 SLC38A3Q99624 504 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 KXD1Q9BQD3 176 aa11.98□□□□□ -0.49
UBE3B-209ENST00000539584 MYO7AQ13402 2215 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 TRAV36DV7A0A075B6V5 113 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 OR5H14A6NHG9 310 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 DISC1C4P0D8 188 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 ATP6V1G2-DDX39BF2Z307 99 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 H0YC42 278 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 TEX46H3BTG2 121 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 ABCD4O14678 606 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 EIF4E2O60573 245 aaKnown RBP11.97□□□□□ -0.49
UBE3B-209ENST00000539584 SCGNO76038 276 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 IGFBP3P17936 291 aaPredicted RBP11.97□□□□□ -0.49
UBE3B-209ENST00000539584 RAB3AP20336 220 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 RAB6AP20340 208 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 COL9A1P20849 921 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 TACR3P29371 465 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 CCR4P51679 360 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 RIDAP52758 137 aaKnown RBP11.97□□□□□ -0.49
UBE3B-209ENST00000539584 OC90Q02509 493 aaPredicted RBP11.97□□□□□ -0.49
UBE3B-209ENST00000539584 PLA2G7Q13093 441 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 CD226Q15762 336 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 VWA2Q5GFL6 755 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 LY6G6FQ5SQ64 297 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 Q6ZSR6 202 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 ADGRE4PQ86SQ3 457 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 NKAIN3Q8N8D7 197 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 OR52H1Q8NGJ2 320 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 DUSP19Q8WTR2 217 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 MRPS24Q96EL2 167 aaKnown RBP11.97□□□□□ -0.49
UBE3B-209ENST00000539584 SLC41A2Q96JW4 573 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 PRRT1Q99946 306 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 C1QTNF6Q9BXI9 259 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 VSX1Q9NZR4 365 aaPredicted RBP11.97□□□□□ -0.49
UBE3B-209ENST00000539584 GPR160Q9UJ42 338 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 B9D1Q9UPM9 204 aa11.97□□□□□ -0.49
UBE3B-209ENST00000539584 TICRRQ7Z2Z1 1910 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 A0A087WV48 116 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 TRAV14DV4A0A0A6YYC5 116 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 A0A1B0GTH9 108 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 PRSS37A4D1T9 235 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 POM121CA8CG34 1229 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 CHURC1-FNTBB4DL54 471 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 ZNF736B4DX44 427 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-209ENST00000539584 H0YIG0 161 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 EIF1AYO14602 144 aaKnown RBP11.96□□□□□ -0.49
UBE3B-209ENST00000539584 SPDEFO95238 335 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 KLF8O95600 359 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-209ENST00000539584 EIF1AXP47813 144 aaKnown RBP11.96□□□□□ -0.49
UBE3B-209ENST00000539584 STARP49675 285 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 DCAF7P61962 342 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 GUCA2AQ02747 115 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 HHEXQ03014 270 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 SGCBQ16585 318 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 C11orf87Q6NUJ2 197 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 ZSCAN1Q8NBB4 408 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 ASB5Q8WWX0 329 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 METTL21AQ8WXB1 218 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 TAAR8Q969N4 342 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 KTI12Q96EK9 354 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-209ENST00000539584 MRGPRX1Q96LB2 322 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 ZNF285Q96NJ3 590 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 PIGMQ9H3S5 423 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 IFT46Q9NQC8 304 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 PRMT8Q9NR22 394 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-209ENST00000539584 KCNG2Q9UJ96 466 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 TNFSF18Q9UNG2 199 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 PLCL2Q9UPR0 1127 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 PLEKHA6Q9Y2H5 1048 aa11.96□□□□□ -0.49
UBE3B-209ENST00000539584 A0A1W2PPC1 479 aa11.96□□□□□ -0.5
UBE3B-209ENST00000539584 LOC390937A0A1W2PQ73 354 aa11.96□□□□□ -0.5
UBE3B-209ENST00000539584 A0A1W2PQD3 144 aa11.96□□□□□ -0.5
UBE3B-209ENST00000539584 FRG2CA6NGY1 282 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms