RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 FAM157CP0CG43 387 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 IGFBP5P24593 272 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 APEX1P27695 318 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 IL2RGP31785 369 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 RPL27P61353 136 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 MRPS34P82930 218 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 PLP2Q04941 152 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 PRKCDQ05655 676 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 RIN1Q13671 783 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TRIP10Q15642 601 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TBC1D28Q2M2D7 210 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 PABPC1L2AQ5JQF8 200 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ZNF730Q6ZMV8 503 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 IL17RELQ6ZVW7 336 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 LRRC75AQ8NAA5 344 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ICA1LQ8NDH6 482 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 OR13C2Q8NGS9 318 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 NABP1Q96AH0 204 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SNX18Q96RF0 628 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 KCNN2Q9H2S1 579 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 MS4A5Q9H3V2 200 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SIAEQ9HAT2 523 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CCNB1IP1Q9NPC3 277 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 DNHD1Q96M86 4753 aa16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 FBN1P35555 2871 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SLC22A23A1A5C7 686 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 LILRA1O75019 489 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CLPTM1O96005 669 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TGFAP01135 160 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 PTHP01270 115 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 HPXP02790 462 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 LCKP06239 509 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 GPR4P46093 362 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CHN2P52757 468 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 FHL1Q13642 323 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TAF11Q15544 211 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ELFN2Q5R3F8 820 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SLC25A47Q6Q0C1 308 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 HACD2Q6Y1H2 254 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 OAFQ86UD1 273 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CPEB3Q8NE35 698 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 OR1J2Q8NGS2 313 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TSPAN32Q96QS1 320 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ALG12Q9BV10 488 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 FAM107BQ9H098 131 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 LRMDAQ9H2I8 198 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 C1orf198Q9H425 327 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SMURF2Q9HAU4 748 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TAAR3PQ9P1P4 343 aa16.35■□□□□ 0.21
TNFRSF1A-212ENST00000539372 MALRD1Q5VYJ5 2156 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 A0A087WUU8 490 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 HTR3EA5X5Y0 456 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 PRSS23O95084 383 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SNAP29O95721 258 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 IGHMP01871 453 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 TACSTD2P09758 323 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ZNF32P17041 273 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 CCNOP22674 350 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 COL8A2P25067 703 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 APLNRP35414 380 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 UCP2P55851 309 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 PSME3P61289 254 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ERVK-25P63136 954 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 NKPD1Q17RQ9 610 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 MBOAT2Q6ZWT7 520 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 AKR7LQ8NHP1 331 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ACOT11Q8WXI4 607 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 MYLK2Q9H1R3 596 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 LPAR3Q9UBY5 353 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 EGFL7Q9UHF1 273 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 ATRQ13535 2644 aa16.34■□□□□ 0.21
TNFRSF1A-212ENST00000539372 SVEP1Q4LDE5 3571 aa16.33■□□□□ 0.21
TNFRSF1A-212ENST00000539372 H7C1C5 153 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 CDC42EP2O14613 210 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 NCR1O76036 304 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 NR2C1P13056 603 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 STOMP27105 288 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 RAD52P43351 418 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SELENOVP59797 346 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 LCN6P62502 163 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 CCNIQ14094 377 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 FAM120AOSQ5T036 256 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 THEM4Q5T1C6 240 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 TSEN54Q7Z6J9 526 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 RNF113BQ8IZP6 322 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ZNF519Q8TB69 540 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 SYNPRQ8TBG9 265 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 CMTM5Q96DZ9 223 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 RBP7Q96R05 134 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 NMNAT1Q9HAN9 279 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ABCD2Q9UBJ2 740 aa16.33■□□□□ 0.2
TNFRSF1A-212ENST00000539372 A0A1W2PPL8 197 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 GMNCA6NCL1 334 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 RNF212BA8MTL3 300 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 NDUFAB1O14561 156 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 MGRN1O60291 552 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 ZNF250P15622 560 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 LAP3P28838 519 aa16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 RPL4P36578 427 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1A-212ENST00000539372 MAGEB1P43366 347 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms