RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 CHST8Q9H2A9 424 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 HRH3Q9Y5N1 445 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 A0A1B0GTW7 788 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 SELENOFO60613 162 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 TGM1P22735 817 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 S100A11P31949 105 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 BCL6P41182 706 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 APOBEC1P41238 236 aaKnown RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 CYB561P49447 251 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 SEMA3BQ13214 749 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 CLINT1Q14677 625 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 FAM26DQ5JW98 314 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 GDPD3Q7L5L3 318 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 PELI3Q8N2H9 469 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 KDM8Q8N371 416 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 ZADH2Q8N4Q0 377 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 TMEM217Q8N7C4 229 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 UFSP2Q9NUQ7 469 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 ITGB4P16144 1822 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 FABP7O15540 132 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 MLF2Q15773 248 aaPredicted RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 MARCH3Q86UD3 253 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 LIPHQ8WWY8 451 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 MRPL38Q96DV4 380 aaKnown RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 GNB4Q9HAV0 340 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 TACR1P25103 407 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 SUB1P53999 127 aaKnown RBP eCLIP8.75□□□□□ -1.01
TNC-210ENST00000535648 LIM2P55344 173 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 EDDM3BP56851 147 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 CSNK1G2P78368 415 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 AVPI1Q5T686 147 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 C1orf140Q5VVS0 124 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 MFSD12Q6NUT3 480 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 ZNF813Q6ZN06 617 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 GRINAQ7Z429 371 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 CPEB3Q8NE35 698 aaKnown RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 TRAF3IP2O43734 574 aaPredicted RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 OR10J4P0C629 311 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 TCN2P20062 427 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 TAGLN2P37802 199 aaKnown RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 KDM4DQ6B0I6 523 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 LINC00696Q6ZRV3 163 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 PAQR9Q6ZVX9 377 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 LFNGQ8NES3 379 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 TTC9Q92623 222 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 RASD2Q96D21 266 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 RNF170Q96K19 258 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 ELF4Q99607 663 aaPredicted RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 FN3KRPQ9HA64 309 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 PATZ1Q9HBE1 687 aaKnown RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 SLC22A11Q9NSA0 550 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 CCL26Q9Y258 94 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 NUDT19A8MXV4 375 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 EIF4E2O60573 245 aaKnown RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 VRK3Q8IV63 474 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 SEMA6DQ8NFY4 1073 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 PFN4Q8NHR9 129 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 SLC25A43Q8WUT9 341 aaPredicted RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 YIPF5Q969M3 257 aa8.75□□□□□ -1.01
TNC-210ENST00000535648 SAT2Q96F10 170 aaPredicted RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 DCLRE1CQ96SD1 692 aaKnown RBP8.75□□□□□ -1.01
TNC-210ENST00000535648 DVL1O14640 695 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 ALOX12BO75342 701 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 ATP1B1P05026 303 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 TGM4P49221 684 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 DVL1P1P54792 670 aaPredicted RBP8.74□□□□□ -1.01
TNC-210ENST00000535648 PXDC1Q5TGL8 231 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 HIST2H3AQ71DI3 136 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 OVCH1Q7RTY7 1134 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 H2BFWTQ7Z2G1 175 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 LGI3Q8N145 548 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 LSMEM1Q8N8F7 131 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 TEX19Q8NA77 164 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 NIPSNAP1Q9BPW8 284 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 CDCP1Q9H5V8 836 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 HEYLQ9NQ87 328 aaPredicted RBP8.74□□□□□ -1.01
TNC-210ENST00000535648 OR6C76A6NM76 312 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 M0QYG6 137 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 RRP8O43159 456 aaKnown RBP8.74□□□□□ -1.01
TNC-210ENST00000535648 RAF1P04049 648 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 CALCBP10092 127 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 SLC35A2P78381 396 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 ZMAT1Q5H9K5 638 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 ABHD17CQ6PCB6 329 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 GLIPR1L1Q6UWM5 242 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 TMEM200AQ86VY9 491 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 PLPP6Q8IY26 295 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 PLPP7Q8NBV4 271 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 NXPE3Q969Y0 559 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 EGLN1Q9GZT9 426 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 ASIC5Q9NY37 505 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 PADI1Q9ULC6 663 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 SOD1P00441 154 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 APOA2P02652 100 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 F11P03951 625 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 TESK1Q15569 626 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 IAH1Q2TAA2 248 aaPredicted RBP8.74□□□□□ -1.01
TNC-210ENST00000535648 PHLDA2Q53GA4 152 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 DOK3Q7L591 496 aa8.74□□□□□ -1.01
TNC-210ENST00000535648 CISD2Q8N5K1 135 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms