RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 TPD52L3Q96J77 140 aa11.36□□□□□ -0.59
CLSTN3-205ENST00000535452 ZNF347Q96SE7 839 aa11.36□□□□□ -0.59
CLSTN3-205ENST00000535452 DIRC2Q96SL1 478 aa11.36□□□□□ -0.59
CLSTN3-205ENST00000535452 GAL3ST1Q99999 423 aa11.36□□□□□ -0.59
CLSTN3-205ENST00000535452 PCDHAC1Q9H158 963 aa11.36□□□□□ -0.59
CLSTN3-205ENST00000535452 SMURF2Q9HAU4 748 aa11.36□□□□□ -0.59
CLSTN3-205ENST00000535452 ELOVL3Q9HB03 270 aa11.36□□□□□ -0.59
CLSTN3-205ENST00000535452 NKIRAS2Q9NYR9 191 aa11.36□□□□□ -0.59
CLSTN3-205ENST00000535452 TREM2Q9NZC2 230 aa11.36□□□□□ -0.59
CLSTN3-205ENST00000535452 PCDHB10Q9UN67 800 aa11.36□□□□□ -0.59
CLSTN3-205ENST00000535452 A6NIZ1 184 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 MRASO14807 208 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 CCL2P13500 99 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 COL8A2P25067 703 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 ZNF81P51508 661 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 RAP1BP61224 184 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 RAP1AP62834 184 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 MVKQ03426 396 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 TOP3AQ13472 1001 aaPredicted RBP11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 TSTQ16762 297 aaKnown RBP11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 ALG10Q5BKT4 473 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 COQ5Q5HYK3 327 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 CCDC80Q76M96 950 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 LRP11Q86VZ4 500 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 BPIFB2Q8N4F0 458 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 LRRC17Q8N6Y2 441 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 NSMAFQ92636 917 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 TAMM41Q96BW9 452 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 ZMYND19Q96E35 227 aaPredicted RBP11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 RIMS3Q9UJD0 308 aa11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 NDRG4Q9ULP0 352 aaKnown RBP11.35□□□□□ -0.59
CLSTN3-205ENST00000535452 MXRA5Q9NR99 2828 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 C5orf49A4QMS7 147 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 XKRYO14609 159 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 GSTA4O15217 222 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 TRMUO75648 421 aaKnown RBP11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 MPZL1O95297 269 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 IGF2P01344 180 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 ZNF250P15622 560 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 GSTM3P21266 225 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 GATA3P23771 443 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 FPR2P25090 351 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 AQP2P41181 271 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 CRYBB2P43320 205 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 MAGEB1P43366 347 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 MRPS34P82930 218 aaKnown RBP11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 GLO1Q04760 184 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 ANKDD1AQ495B1 522 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 PABPC1L2AQ5JQF8 200 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 THEM4Q5T1C6 240 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 DCAF12L2Q5VW00 463 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 NANOGP8Q6NSW7 305 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 LRFN4Q6PJG9 635 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 USP51Q70EK9 711 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 ARPINQ7Z6K5 226 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 CYP4Z1Q86W10 505 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 RBM45Q8IUH3 476 aaKnown RBP11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 GPR32P1Q8NGA4 272 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 NANPQ8TBE9 248 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 ASB10Q8WXI3 467 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 CCL17Q92583 94 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 GCDHQ92947 438 aaPredicted RBP11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 LRRC58Q96CX6 371 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 C1orf159Q96HA4 380 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 SOX7Q9BT81 388 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 ALG12Q9BV10 488 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 FNDC11Q9BVV2 318 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 RBM4Q9BWF3 364 aaKnown RBP11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 SUCNR1Q9BXA5 334 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 ZNF665Q9H7R5 613 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 KRCC1Q9NPI7 259 aaPredicted RBP11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 ZNF224Q9NZL3 707 aa11.34□□□□□ -0.59
CLSTN3-205ENST00000535452 IGLV3-9A0A075B6K5 115 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 A0A1W2PPL8 197 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 C12orf71A8MTZ7 269 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 J3QLI3 93 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 SPRY3O43610 288 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 EDF1O60869 148 aaKnown RBP11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 GMNNO75496 209 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 IFNW1P05000 195 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 IFI30P13284 250 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 TNFRSF1AP19438 455 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 RPL4P36578 427 aaKnown RBP11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 LIMS1P48059 325 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 ARFIP2P53365 341 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 UGT2B15P54855 530 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 SRSF2Q01130 221 aaKnown RBP11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 SELPLGQ14242 412 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 C10orf128Q5T292 105 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 AVPI1Q5T686 147 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 THSD4Q6ZMP0 1018 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 WDR88Q6ZMY6 472 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 ZNF584Q8IVC4 421 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 C3orf56Q8N813 242 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 OR2T12Q8NG77 320 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 ABHD4Q8TB40 342 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 TMEM255BQ8WV15 326 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 COG8Q96MW5 612 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 ZNF75AQ96N20 296 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 WFDC6Q9BQY6 131 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms