RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 UPB1Q9UBR1 384 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 TRAV8-7A0A075B6U6 113 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 MEX3AA1L020 520 aaKnown RBP13.49□□□□□ -0.25
NXF1-213ENST00000532297 TGFBR3LH3BV60 316 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 PRSS3P35030 304 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 RPS27P42677 84 aaKnown RBP13.49□□□□□ -0.25
NXF1-213ENST00000532297 SNRPEP62304 92 aaKnown RBP13.49□□□□□ -0.25
NXF1-213ENST00000532297 MGAT2Q10469 447 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 ANKRD16Q6P6B7 361 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 FAM122BQ7Z309 247 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 DMBX1Q8NFW5 382 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 OR1J4Q8NGS1 313 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 OR1J2Q8NGS2 313 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 OR9A4Q8NGU2 314 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 TSSK2Q96PF2 358 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 SFXN1Q9H9B4 322 aa13.49□□□□□ -0.25
NXF1-213ENST00000532297 SDK1Q7Z5N4 2213 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 POU2F2P09086 479 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 OR8G3PP0DMU2 310 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 SMIM10L1P0DMW3 83 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 ZNF10P21506 573 aaPredicted RBP13.48□□□□□ -0.25
NXF1-213ENST00000532297 RPL4P36578 427 aaKnown RBP13.48□□□□□ -0.25
NXF1-213ENST00000532297 PTGFRP43088 359 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 HYAL4Q2M3T9 481 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 NKAIN2Q5VXU1 208 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 KIRREL2Q6UWL6 708 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 C7orf61Q8IZ16 206 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 PPP1R1CQ8WVI7 109 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 RNF166Q96A37 237 aaPredicted RBP13.48□□□□□ -0.25
NXF1-213ENST00000532297 TM4SF19Q96DZ7 209 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 SMIM10Q96HG1 83 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 BMFQ96LC9 184 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 KLHDC3Q9BQ90 382 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 TMEM231Q9H6L2 316 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 TREM1Q9NP99 234 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 GSN-AS1Q9NRJ2 163 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 STEAP1Q9UHE8 339 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 CARHSP1Q9Y2V2 147 aaKnown RBP13.48□□□□□ -0.25
NXF1-213ENST00000532297 NOP16Q9Y3C1 178 aaKnown RBP13.48□□□□□ -0.25
NXF1-213ENST00000532297 A0A1W2PQF6 199 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 C17orf51A8MQB3 221 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 KLF8O95600 359 aaPredicted RBP13.48□□□□□ -0.25
NXF1-213ENST00000532297 SLC25A4P12235 298 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 SPI1P17947 270 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 NFYBP25208 207 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 CD34P28906 385 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 ATP1B3P54709 279 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 TSC22D1Q15714 1073 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 ALG10BQ5I7T1 473 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 C9orf50Q5SZB4 431 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 ABHD13Q7L211 337 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 GTPBP8Q8N3Z3 284 aaPredicted RBP13.48□□□□□ -0.25
NXF1-213ENST00000532297 CLEC1AQ8NC01 280 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 OR6S1Q8NH40 331 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 SPACA7Q96KW9 195 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 PTDSS2Q9BVG9 487 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 KCNK15Q9H427 330 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 FAM60AQ9NP50 221 aa13.48□□□□□ -0.25
NXF1-213ENST00000532297 WDR87Q6ZQQ6 2873 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 A0A1B0GTH9 108 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 A0A1B0GTI1 187 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 EPOPA6NHQ4 379 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 CYR61O00622 381 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 NDUFB2O95178 105 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 S100A9P06702 114 aaKnown RBP13.47□□□□□ -0.25
NXF1-213ENST00000532297 HOXB2P14652 356 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 CASRP41180 1078 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 KCNAB1Q14722 419 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 PLEKHN1Q494U1 663 aaPredicted RBP13.47□□□□□ -0.25
NXF1-213ENST00000532297 C10orf91Q5T1B1 145 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 C3orf33Q6P1S2 294 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 GABRG1Q8N1C3 465 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 CNTNAP3BQ96NU0 1288 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 STACQ99469 402 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 A0A0B4J2E0 115 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 A0A1B0GX12 115 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 M0QYG6 137 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 BRINP1O60477 761 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 C1orf61Q13536 156 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 ODF4Q2M2E3 257 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 LIPNQ5VXI9 398 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 RBMS3Q6XE24 437 aaKnown RBP13.47□□□□□ -0.25
NXF1-213ENST00000532297 ZNF600Q6ZNG1 722 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 FRRS1LQ9P0K9 344 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 SPACA6W5XKT8 324 aa13.47□□□□□ -0.25
NXF1-213ENST00000532297 A0A087WV62 115 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 H7C1C5 153 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 RAB3DO95716 219 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 CBR1P16152 277 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 CAPZA1P52907 286 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 PNLIPRP2P54317 469 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 LCN6P62502 163 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 PSG6Q00889 435 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 DHRS2Q13268 280 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 ZNF813Q6ZN06 617 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 FAM220AQ7Z4H9 259 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 BIVMQ86UB2 503 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 CA13Q8N1Q1 262 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 EDAQ92838 391 aa13.46□□□□□ -0.25
NXF1-213ENST00000532297 TCEAL3Q969E4 200 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms