RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 MAPRE2Q15555 327 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 CYBRD1Q53TN4 286 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 TMEM154Q6P9G4 183 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 GLCCI1Q86VQ1 547 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 CPEB3Q8NE35 698 aaKnown RBP13.49□□□□□ -0.25
CPSF1-205ENST00000531042 HDAC2Q92769 488 aaKnown RBP13.49□□□□□ -0.25
CPSF1-205ENST00000531042 NMD3Q96D46 503 aaKnown RBP13.49□□□□□ -0.25
CPSF1-205ENST00000531042 ZNF416Q9BWM5 594 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 SMURF2Q9HAU4 748 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 SAR1AQ9NR31 198 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 SLCO1C1Q9NYB5 712 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 UGT2A1Q9Y4X1 527 aa13.49□□□□□ -0.25
CPSF1-205ENST00000531042 IGKV1D-43A0A0B4J1Z2 117 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 LOC100653049A0A140TA62 436 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 FAM220BPB1ANY3 271 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 TCF21O43680 179 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 PIP5K1CO60331 668 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 KRT34O76011 436 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 CDAP32320 146 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 APLNRP35414 380 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 CCL8P80075 99 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 HSF2Q03933 536 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 PCGF3Q3KNV8 242 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 LRRC23Q53EV4 343 aaPredicted RBP13.48□□□□□ -0.25
CPSF1-205ENST00000531042 PABPC1L2AQ5JQF8 200 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 CGB2Q6NT52 195 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 RINLQ6ZS11 566 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 PCYOX1LQ8NBM8 494 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 SNX33Q8WV41 574 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 NABP1Q96AH0 204 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 KCNN2Q9H2S1 579 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 TXNIPQ9H3M7 391 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 GID8Q9NWU2 228 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 NKIRAS2Q9NYR9 191 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 TREM2Q9NZC2 230 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 HIF3AQ9Y2N7 669 aa13.48□□□□□ -0.25
CPSF1-205ENST00000531042 CDC14BO60729 498 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 GAAP10253 952 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 ZNF32P17041 273 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 LMO4P61968 165 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 SELENOWP63302 87 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 FMODQ06828 376 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 CD47Q08722 323 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 ST3GAL3Q11203 375 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 SF3A3Q12874 501 aaKnown RBP eCLIP13.47□□□□□ -0.255e-7■■■■■ 49.2
CPSF1-205ENST00000531042 TAF11Q15544 211 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 MOGQ16653 247 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 ALG10Q5BKT4 473 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 SLC25A47Q6Q0C1 308 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 ICA1LQ8NDH6 482 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 OR2T12Q8NG77 320 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 OR1J1Q8NGS3 322 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 NSMAFQ92636 917 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 TMEM186Q96B77 213 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 BPIFA2Q96DR5 249 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 TPD52L3Q96J77 140 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 CCNB1IP1Q9NPC3 277 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 FGFR1OP2Q9NVK5 253 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 HIF1ANQ9NWT6 349 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 A4GNTQ9UNA3 340 aa13.47□□□□□ -0.25
CPSF1-205ENST00000531042 HTR3EA5X5Y0 456 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 IGHV3-13P01766 116 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 MSMBP08118 114 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 NR2C1P13056 603 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 IFI30P13284 250 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 CCNOP22674 350 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 STOMP27105 288 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 CRYBB2P43320 205 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 RPL27P61353 136 aaKnown RBP13.46□□□□□ -0.25
CPSF1-205ENST00000531042 SGCAQ16586 387 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 MICU2Q8IYU8 434 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 POM121L2Q96KW2 1035 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 PRRC1Q96M27 445 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 ALG12Q9BV10 488 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 LPAR2Q9HBW0 351 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 METRNQ9UJH8 293 aa13.46□□□□□ -0.25
CPSF1-205ENST00000531042 LOC100509620A0A075B734 347 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 IGHV1-69-2A0A0G2JMI3 117 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 ELOVL7A1L3X0 281 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 GMNCA6NCL1 334 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 IGHMP01871 453 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 MT-ND5P03915 603 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 ITGA2P17301 1181 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 DRD4P21917 467 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 FUT4P22083 530 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 IFNA8P32881 189 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 WNT5AP41221 380 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 ERVK-25P63136 954 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 PSG4Q00888 419 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 TEKQ02763 1124 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 TOP3AQ13472 1001 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-205ENST00000531042 THEM4Q5T1C6 240 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 FAM27BQ5VT28 67 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 ZNF101Q8IZC7 436 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 LRRC75AQ8NAA5 344 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 OR51F2Q8NH61 342 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 AKR7LQ8NHP1 331 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 FNDC8Q8TC99 324 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 GTF3AQ92664 365 aaKnown RBP13.45□□□□□ -0.26
CPSF1-205ENST00000531042 LRRC37BQ96QE4 947 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms