RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 DEFB113Q30KQ7 82 aa13.74□□□□□ -0.21
CTSB-219ENST00000530640 MEDAGQ5VYS4 303 aa13.74□□□□□ -0.21
CTSB-219ENST00000530640 PLBD1Q6P4A8 553 aa13.74□□□□□ -0.21
CTSB-219ENST00000530640 VWA1Q6PCB0 445 aa13.74□□□□□ -0.21
CTSB-219ENST00000530640 BCDIN3DQ7Z5W3 292 aaKnown RBP13.74□□□□□ -0.21
CTSB-219ENST00000530640 CPOQ8IVL8 374 aa13.74□□□□□ -0.21
CTSB-219ENST00000530640 BBS1Q8NFJ9 593 aa13.74□□□□□ -0.21
CTSB-219ENST00000530640 SLC25A44Q96H78 314 aaPredicted RBP13.74□□□□□ -0.21
CTSB-219ENST00000530640 ZNF582Q96NG8 517 aaPredicted RBP13.74□□□□□ -0.21
CTSB-219ENST00000530640 ALG12Q9BV10 488 aa13.74□□□□□ -0.21
CTSB-219ENST00000530640 EMC6Q9BV81 110 aa13.74□□□□□ -0.21
CTSB-219ENST00000530640 PRRG4Q9BZD6 226 aa13.74□□□□□ -0.21
CTSB-219ENST00000530640 LIME1Q9H400 295 aa13.74□□□□□ -0.21
CTSB-219ENST00000530640 SLC22A23A1A5C7 686 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 SH3D21A4FU49 640 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 A8MXE2 369 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 PRR23D1E9PI22 279 aaPredicted RBP13.73□□□□□ -0.21
CTSB-219ENST00000530640 SLC1A7O00341 560 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 GPR171O14626 319 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 MSTNO14793 375 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 PRODHO43272 600 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 ARHGEF9O43307 516 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 ENTPD6O75354 484 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 IGHG1P01857 330 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 PRR23D2P0DMB1 279 aaPredicted RBP13.73□□□□□ -0.21
CTSB-219ENST00000530640 AGTR1P30556 359 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 FMO3P31513 532 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 SMN1Q16637 294 aaKnown RBP13.73□□□□□ -0.21
CTSB-219ENST00000530640 HIST3H3Q16695 136 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 C6orf141Q5SZD1 244 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 GID4Q8IVV7 300 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 LINC01560Q8TB33 94 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 PTP4A1Q93096 173 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 KISS1RQ969F8 398 aaPredicted RBP13.73□□□□□ -0.21
CTSB-219ENST00000530640 GMPPAQ96IJ6 420 aaPredicted RBP13.73□□□□□ -0.21
CTSB-219ENST00000530640 SYT4Q9H2B2 425 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 MED20Q9H944 212 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 GLRX2Q9NS18 164 aa13.73□□□□□ -0.21
CTSB-219ENST00000530640 ZNF469Q96JG9 3925 aaPredicted RBP13.73□□□□□ -0.21
CTSB-219ENST00000530640 CCDC182A6NF36 153 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 DCTN6O00399 190 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 ATE1O95260 518 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 RENP00797 406 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 CCDC159P0C7I6 412 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 CLUP10909 449 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 SELENOPP49908 381 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 ZNF133P52736 654 aaPredicted RBP13.72□□□□□ -0.21
CTSB-219ENST00000530640 DBPQ10586 325 aaPredicted RBP13.72□□□□□ -0.21
CTSB-219ENST00000530640 CAMK2DQ13557 499 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 SHEQ5VZ18 495 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 GTF2IRD2BQ6EKJ0 949 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 GTF2IRD2Q86UP8 949 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 ZBTB46Q86UZ6 589 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 TUSC5Q8IXB3 177 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 ZNF786Q8N393 782 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 OR9Q1Q8NGQ5 310 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 TMEM54Q969K7 222 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 STARD4Q96DR4 205 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 Q96MT0 163 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 DACH2Q96NX9 599 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 RPRD1BQ9NQG5 326 aaKnown RBP13.72□□□□□ -0.21
CTSB-219ENST00000530640 PLCXD1Q9NUJ7 323 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 BEX4Q9NWD9 120 aaPredicted RBP13.72□□□□□ -0.21
CTSB-219ENST00000530640 CLN6Q9NWW5 311 aa13.72□□□□□ -0.21
CTSB-219ENST00000530640 IGLV1-36A0A0B4J1U3 117 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 TRIM64A6NGJ6 449 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 M0R3G1 203 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 YES1P07947 543 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 CTLA4P16410 223 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 SPI1P17947 270 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 CRHBPP24387 322 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 HTR1FP30939 366 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 KIR2DL2P43627 348 aaPredicted RBP13.71□□□□□ -0.21
CTSB-219ENST00000530640 SLC15A1P46059 708 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 CHN2P52757 468 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 NUDT6P53370 316 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 CDH11P55287 796 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 ZNF91Q05481 1191 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 RBM48Q5RL73 367 aaKnown RBP13.71□□□□□ -0.21
CTSB-219ENST00000530640 LINC01590Q5TEZ4 76 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 BTLAQ7Z6A9 289 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 C20orf196Q8IYI0 205 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 RFKQ969G6 155 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 C18orf12Q96KH6 178 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 TSSK2Q96PF2 358 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 NR1H4Q96RI1 486 aaPredicted RBP13.71□□□□□ -0.21
CTSB-219ENST00000530640 RACGAP1Q9H0H5 632 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 OPN3Q9H1Y3 402 aaPredicted RBP13.71□□□□□ -0.21
CTSB-219ENST00000530640 PLEKHF2Q9H8W4 249 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 ASB6Q9NWX5 421 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 CLEC4AQ9UMR7 237 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 FKBP7Q9Y680 259 aa13.71□□□□□ -0.21
CTSB-219ENST00000530640 SLC22A31A6NKX4 558 aa13.71□□□□□ -0.22
CTSB-219ENST00000530640 ZNF726A6NNF4 738 aa13.71□□□□□ -0.22
CTSB-219ENST00000530640 GYPBP06028 91 aa13.71□□□□□ -0.22
CTSB-219ENST00000530640 DBTP11182 482 aaKnown RBP13.71□□□□□ -0.22
CTSB-219ENST00000530640 NR2C1P13056 603 aa13.71□□□□□ -0.22
CTSB-219ENST00000530640 EDNRAP25101 427 aa13.71□□□□□ -0.22
CTSB-219ENST00000530640 HOXC12P31275 282 aa13.71□□□□□ -0.22
CTSB-219ENST00000530640 CSNK1A1P48729 337 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms