RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 KRR1Q13601 381 aaKnown RBP11□□□□□ -0.65
CCDC90B-216ENST00000529856 GK3PQ14409 553 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 MESTQ5EB52 335 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 ZNF544Q6NX49 715 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 FOXL2NBQ6ZUU3 175 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 SLC16A14Q7RTX9 510 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 DTX2Q86UW9 622 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 PAPD5Q8NDF8 572 aaKnown RBP11□□□□□ -0.65
CCDC90B-216ENST00000529856 FANK1Q8TC84 345 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 NABP1Q96AH0 204 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 SAMD8Q96LT4 415 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 TRAF4Q9BUZ4 470 aaPredicted RBP11□□□□□ -0.65
CCDC90B-216ENST00000529856 GSX2Q9BZM3 304 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 GRIP2Q9C0E4 1043 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 LRMDAQ9H2I8 198 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 CXorf56Q9H5V9 222 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 ZNF701Q9NV72 531 aaPredicted RBP11□□□□□ -0.65
CCDC90B-216ENST00000529856 FBXL3Q9UKT7 428 aa11□□□□□ -0.65
CCDC90B-216ENST00000529856 IGHV2OR16-5A0A0B4J2B6 119 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 SOCS2O14508 198 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 PPP1R3DO95685 299 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 RAB36O95755 333 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 SERPINA5P05154 406 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 APOBEC3AP31941 199 aaPredicted RBP10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 CDKN2AP42771 156 aaKnown RBP10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 PTH2RP49190 550 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 NKX6-1P78426 367 aaPredicted RBP10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 HGFACQ04756 655 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 RAB39AQ14964 217 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 ETFDHQ16134 617 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 SGCAQ16586 387 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 SLC36A2Q495M3 483 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 FAM27BQ5VT28 67 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 AGAP6Q5VW22 663 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 TMEM53Q6P2H8 277 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 ZNF620Q6ZNG0 422 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 FBXL14Q8N1E6 418 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 LRRC18Q8N456 261 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 AQP11Q8NBQ7 271 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 OR4F15Q8NGB8 312 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 SLCO4A1Q96BD0 722 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 ERMAPQ96PL5 475 aaPredicted RBP10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 IFT27Q9BW83 186 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 DGCR6LQ9BY27 220 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 YY1AP1Q9H869 796 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 RNF121Q9H920 327 aa10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 VSX1Q9NZR4 365 aaPredicted RBP10.99□□□□□ -0.65
CCDC90B-216ENST00000529856 ARID1AO14497 2285 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 MAP1AP78559 2803 aaPredicted RBP10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 GNGT2O14610 69 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 IDH3BO43837 385 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 FKBP6O75344 327 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 MMP7P09237 267 aaPredicted RBP10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 ZNF35P13682 527 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 GUCA1AP43080 201 aaPredicted RBP10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 ERFP50548 548 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 ADAM8P78325 824 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 CBX1P83916 185 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 SHEQ5VZ18 495 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 RPL13AP3Q6NVV1 102 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 RASSF6Q6ZTQ3 369 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 PTCHD4Q6ZW05 846 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 ASRGL1Q7L266 308 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 ADCK1Q86TW2 530 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 KRTAP1-3Q8IUG1 177 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 ZNF584Q8IVC4 421 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 MUC15Q8N387 334 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 NUP37Q8NFH4 326 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 OR10G2Q8NGC3 310 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 GIPC3Q8TF64 312 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 GTPBP3Q969Y2 492 aaKnown RBP10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 PERPQ96FX8 193 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 KCNN2Q9H2S1 579 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 EGLN3Q9H6Z9 239 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 CBLN4Q9NTU7 201 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 IL20Q9NYY1 176 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 CDH10Q9Y6N8 788 aa10.98□□□□□ -0.65
CCDC90B-216ENST00000529856 USF3Q68DE3 2245 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 A0A1W2PPL8 197 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 SLC16A7O60669 478 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 KHDRBS3O75525 346 aaKnown RBP10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 SCG5P05408 212 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 CST2P09228 141 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 CTLA4P16410 223 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 GSTM3P21266 225 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 NR4A1P22736 598 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 LAP3P28838 519 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 C11orf71Q6IPW1 123 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 PRSS57Q6UWY2 283 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 CD300LDQ6UXZ3 194 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 CCDC121Q6ZUS5 278 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 TMEM179BQ7Z7N9 219 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 TGIF2LYQ8IUE0 185 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 LURAP1LQ8IV03 231 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 FBXO17Q96EF6 278 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 SNX18Q96RF0 628 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 FEVQ99581 238 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 KRTAP3-3Q9BYR6 98 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 KRTAP3-2Q9BYR7 98 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 NUAK2Q9H093 628 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms