RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 DEFB126Q9BYW3 111 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 POTEKPQ9BYX7 375 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 METTL7AQ9H8H3 244 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 MARCH7Q9H992 704 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 ACOXLQ9NUZ1 547 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 KLRF1Q9NZS2 232 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 PPP4R1LQ9P1A2 415 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 IKZF2Q9UKS7 526 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 COPS3Q9UNS2 423 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 PCDHGA9Q9Y5G4 932 aaKnown RBP10.57□□□□□ -0.72
USF1-208ENST00000528768 NF1P21359 2839 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 IGHV3-20A0A0C4DH32 117 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 LINC00854A0A1B0GVQ3 168 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 FAM240BA0A1B0GVZ2 78 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 SHISA3A0PJX4 238 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 PRSS37A4D1T9 235 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 NPIPB13A6NJU9 1138 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 TMEM212A6NML5 194 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 NPIPB4C9JG80 1138 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 C11orf98E9PRG8 122 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 MEN1O00255 615 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 NPIPB7O75200 414 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 CCNKO75909 580 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 IGHEP01854 428 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 RAF1P04049 648 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 ELK1P19419 428 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 GRPRP30550 384 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 CASP3P42574 277 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 EFNA3P52797 238 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 DLX5P56178 289 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 TPTEP56180 551 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 INSL4Q14641 139 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 INPP5JQ15735 1006 aaPredicted RBP10.56□□□□□ -0.72
USF1-208ENST00000528768 TOMM34Q15785 309 aaPredicted RBP10.56□□□□□ -0.72
USF1-208ENST00000528768 EIF2S3LQ2VIR3 472 aaKnown RBP10.56□□□□□ -0.72
USF1-208ENST00000528768 RSBN1Q5VWQ0 802 aaPredicted RBP10.56□□□□□ -0.72
USF1-208ENST00000528768 BICRALQ6AI39 1079 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 SLC18B1Q6NT16 456 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 LRRN1Q6UXK5 716 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 HDDC2Q7Z4H3 204 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 TIGD4Q8IY51 512 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 RDH10Q8IZV5 341 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 ZNF511Q8NB15 262 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 APCDD1LQ8NCL9 501 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 RPS4Y2Q8TD47 263 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 SMAP2Q8WU79 429 aaPredicted RBP10.56□□□□□ -0.72
USF1-208ENST00000528768 HGDQ93099 445 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 RFT1Q96AA3 541 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 MRGPRX4Q96LA9 322 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 ZCCHC4Q9H5U6 513 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 TCF7L1Q9HCS4 588 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 RBFOX1Q9NWB1 397 aaKnown RBP10.56□□□□□ -0.72
USF1-208ENST00000528768 TAS2R5Q9NYW4 299 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 VSX1Q9NZR4 365 aaPredicted RBP10.56□□□□□ -0.72
USF1-208ENST00000528768 MALT1Q9UDY8 824 aa10.56□□□□□ -0.72
USF1-208ENST00000528768 HMX3A6NHT5 357 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 FAM171A2A8MVW0 826 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 NPIPA5E9PKD4 350 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 PLPP3O14495 311 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 LYRM1O43325 122 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 ORC5O43913 435 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 FZD7O75084 574 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 UBL3O95164 117 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 TFPIP10646 304 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 EPXP11678 715 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 SRMP19623 302 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 DLSTP36957 453 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 PSMB10P40306 273 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 FBXW4P57775 412 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 CBX3Q13185 183 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 EXT1Q16394 746 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 ACKR1Q16570 336 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 Q499Y3 187 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 ZNF684Q5T5D7 378 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 ATP1A1-AS1Q5TC04 95 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 ZNF385CQ66K41 422 aaPredicted RBP10.55□□□□□ -0.72
USF1-208ENST00000528768 C6orf15Q6UXA7 325 aaPredicted RBP10.55□□□□□ -0.72
USF1-208ENST00000528768 H1FNTQ75WM6 255 aaPredicted RBP10.55□□□□□ -0.72
USF1-208ENST00000528768 DND1Q8IYX4 353 aaKnown RBP10.55□□□□□ -0.72
USF1-208ENST00000528768 OR6V1Q8N148 313 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 ZNF676Q8N7Q3 588 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 ZPLD1Q8TCW7 415 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 THEM6Q8WUY1 208 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 NSMAFQ92636 917 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 KCNJ15Q99712 375 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 C7orf50Q9BRJ6 194 aaKnown RBP10.55□□□□□ -0.72
USF1-208ENST00000528768 PTDSS2Q9BVG9 487 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 TTTY10Q9BZA0 68 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 RTN4RQ9BZR6 473 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 C11orf54Q9H0W9 315 aaPredicted RBP10.55□□□□□ -0.72
USF1-208ENST00000528768 SYT4Q9H2B2 425 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 PTGES2Q9H7Z7 377 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 RNF121Q9H920 327 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 BRD7Q9NPI1 651 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 ERRFI1Q9UJM3 462 aaPredicted RBP10.55□□□□□ -0.72
USF1-208ENST00000528768 ZNF221Q9UK13 617 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 ITGB1BP2Q9UKP3 347 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 SPATA2Q9UM82 520 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 NPIPA1Q9UND3 350 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 B9D1Q9UPM9 204 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms