RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 MS4A3Q96HJ5 214 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 NARFLQ9H6Q4 476 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 NTN4Q9HB63 628 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 INIPQ9NRY2 104 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 TMEM38BQ9NVV0 291 aa9.02□□□□□ -0.97
CPSF1-203ENST00000527916 LOC105371242A0A075B767 164 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 SLC22A23A1A5C7 686 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 NDUFAB1O14561 156 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 ATP8B1O43520 1251 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 TRMUO75648 421 aaKnown RBP9.01□□□□□ -0.97
CPSF1-203ENST00000527916 PTHP01270 115 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 IGFBP1P08833 259 aaPredicted RBP9.01□□□□□ -0.97
CPSF1-203ENST00000527916 ACADSP16219 412 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 GIPRP48546 466 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 DAP3P51398 398 aaKnown RBP9.01□□□□□ -0.97
CPSF1-203ENST00000527916 TMEM33P57088 247 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 CLRN1P58418 232 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 RPS23P62266 143 aaKnown RBP9.01□□□□□ -0.97
CPSF1-203ENST00000527916 UBA52P62987 128 aaKnown RBP9.01□□□□□ -0.97
CPSF1-203ENST00000527916 SNTB2Q13425 540 aaKnown RBP9.01□□□□□ -0.97
CPSF1-203ENST00000527916 MELKQ14680 651 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 TAF11Q15544 211 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 LRRC23Q53EV4 343 aaPredicted RBP9.01□□□□□ -0.97
CPSF1-203ENST00000527916 KRT80Q6KB66 452 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 C8orf82Q6P1X6 216 aaPredicted RBP9.01□□□□□ -0.97
CPSF1-203ENST00000527916 RBMS3Q6XE24 437 aaKnown RBP9.01□□□□□ -0.97
CPSF1-203ENST00000527916 HACD2Q6Y1H2 254 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 C1QL2Q7Z5L3 287 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 PFN4Q8NHR9 129 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 NANPQ8TBE9 248 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 FNDC8Q8TC99 324 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 MCHR2Q969V1 340 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 RCN3Q96D15 328 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 PRRC1Q96M27 445 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 SLC6A7Q99884 636 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 MS4A5Q9H3V2 200 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 C1orf198Q9H425 327 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 EFCAB1Q9HAE3 211 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 SMURF2Q9HAU4 748 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 C20orf141Q9NUB4 165 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 CMTM6Q9NX76 183 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 TREM2Q9NZC2 230 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 ARMCX1Q9P291 453 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 SLC7A8Q9UHI5 535 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 A4GNTQ9UNA3 340 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 HIF3AQ9Y2N7 669 aa9.01□□□□□ -0.97
CPSF1-203ENST00000527916 A0A0G2JMP0 313 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 A0A0X1KG70 313 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 MCIDASD6RGH6 385 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 J3QLI3 93 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 SYNGR3O43761 229 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 SHOX2O60902 331 aaPredicted RBP9□□□□□ -0.97
CPSF1-203ENST00000527916 F13BP05160 661 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 NR2C1P13056 603 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 COX4I1P13073 169 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 ACHEP22303 614 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 AQP2P41181 271 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 ZNF84P51523 738 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 MYBPC1Q00872 1141 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 GALK2Q01415 458 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 SF3A3Q12874 501 aaKnown RBP eCLIP9□□□□□ -0.97
CPSF1-203ENST00000527916 RAB39AQ14964 217 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 LAPTM4AQ15012 233 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 ANKDD1AQ495B1 522 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 SLC36A2Q495M3 483 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 C10orf128Q5T292 105 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 ARMC4Q5T2S8 1044 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 CBLL1Q75N03 491 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 ZNF584Q8IVC4 421 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 CDK20Q8IZL9 346 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 RNF113BQ8IZP6 322 aaKnown RBP9□□□□□ -0.97
CPSF1-203ENST00000527916 ZDHHC22Q8N966 263 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 OR4M2Q8NGB6 313 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 FGFBP3Q8TAT2 258 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 ASB10Q8WXI3 467 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 RDH5Q92781 318 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 BPIFA2Q96DR5 249 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 TPD52L3Q96J77 140 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 ZNF347Q96SE7 839 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 MRPL37Q9BZE1 423 aaKnown RBP9□□□□□ -0.97
CPSF1-203ENST00000527916 RACGAP1Q9H0H5 632 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 TXNIPQ9H3M7 391 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 TPK1Q9H3S4 243 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 SIAEQ9HAT2 523 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 ESM1Q9NQ30 184 aa9□□□□□ -0.97
CPSF1-203ENST00000527916 GMNCA6NCL1 334 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 POM121CA8CG34 1229 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 M0R233 179 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 PPIHO43447 177 aaKnown RBP8.99□□□□□ -0.97
CPSF1-203ENST00000527916 SNAP29O95721 258 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 IGHMP01871 453 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 IFNW1P05000 195 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 MMP7P09237 267 aaPredicted RBP8.99□□□□□ -0.97
CPSF1-203ENST00000527916 PATE4P0C8F1 98 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 LSP1P33241 339 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 MRPS34P82930 218 aaKnown RBP8.99□□□□□ -0.97
CPSF1-203ENST00000527916 LIPEQ05469 1076 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 PRKCDQ05655 676 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 TRAM2Q15035 370 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 OCLNQ16625 522 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms