RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 NSMAFQ92636 917 aa19.12■□□□□ 0.65
TRAPPC4-208ENST00000527680 LRRC58Q96CX6 371 aa19.12■□□□□ 0.65
TRAPPC4-208ENST00000527680 SIAEQ9HAT2 523 aa19.12■□□□□ 0.65
TRAPPC4-208ENST00000527680 C20orf141Q9NUB4 165 aa19.12■□□□□ 0.65
TRAPPC4-208ENST00000527680 STX18Q9P2W9 335 aaKnown RBP19.12■□□□□ 0.65
TRAPPC4-208ENST00000527680 EIF3KQ9UBQ5 218 aaKnown RBP19.12■□□□□ 0.65
TRAPPC4-208ENST00000527680 MED31Q9Y3C7 131 aa19.12■□□□□ 0.65
TRAPPC4-208ENST00000527680 IGLV3-9A0A075B6K5 115 aa19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 RP2O75695 350 aa19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 OR5F1O95221 314 aa19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 SLC2A10O95528 541 aa19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 STOMP27105 288 aa19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 LMO4P61968 165 aa19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 GLO1Q04760 184 aa19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 CD47Q08722 323 aa19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 SCGB2A2Q13296 93 aa19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 TSTQ16762 297 aaKnown RBP19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 PABPC1L2AQ5JQF8 200 aa19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 THSD4Q6ZMP0 1018 aa19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 CPEB3Q8NE35 698 aaKnown RBP19.11■□□□□ 0.65
TRAPPC4-208ENST00000527680 TRAV20A0A0B4J274 112 aa19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 IGHV1-69-2A0A0G2JMI3 117 aa19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 MMP7P09237 267 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 GCH1P30793 250 aa19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 CRYBB2P43320 205 aa19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 ACSM5Q6NUN0 579 aa19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 C12orf54Q6X4T0 127 aa19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 USP51Q70EK9 711 aa19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 OR8J3Q8NGG0 315 aa19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 TMEM120AQ9BXJ8 343 aa19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 POLR2J2Q9GZM3 115 aaKnown RBP19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 POLR2J3Q9H1A7 115 aaKnown RBP19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 NKIRAS2Q9NYR9 191 aa19.1■□□□□ 0.65
TRAPPC4-208ENST00000527680 C5orf49A4QMS7 147 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 RGS9O75916 674 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 ZNF32P17041 273 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 IFNA8P32881 189 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 GUCA1AP43080 201 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 MRPS34P82930 218 aaKnown RBP19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 TOP3AQ13472 1001 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 HFEQ30201 348 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 ZNF718Q3SXZ3 478 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 C10orf128Q5T292 105 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 ARMC4Q5T2S8 1044 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 ERICH5Q6P6B1 374 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 UNQ6126/PRO20091Q6UXV3 157 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 CALHM3Q86XJ0 350 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 C10orf82Q8WW14 230 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 TPD52L3Q96J77 140 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 RBP7Q96R05 134 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 SEPHS2Q99611 448 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 ZNF665Q9H7R5 613 aa19.09■□□□□ 0.65
TRAPPC4-208ENST00000527680 A0A0A6YYJ9 748 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 MRASO14807 208 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 VENTXO95231 258 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 MPZL1O95297 269 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 NR2C1P13056 603 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 GDI2P50395 445 aaKnown RBP19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 ZNF81P51508 661 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 FMODQ06828 376 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 SF3A3Q12874 501 aaKnown RBP eCLIP19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 LRRC23Q53EV4 343 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 ALG10Q5BKT4 473 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 SPATA46Q5T0L3 261 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 THEM4Q5T1C6 240 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 AKR7LQ8NHP1 331 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 ZNF418Q8TF45 676 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 GTF3AQ92664 365 aaKnown RBP19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 HDAC2Q92769 488 aaKnown RBP19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 RAB39BQ96DA2 213 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 TIMD4Q96H15 378 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 TXNIPQ9H3M7 391 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 SAP30LQ9HAJ7 183 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 NBEAL1Q6ZS30 2694 aa19.08■□□□□ 0.64
TRAPPC4-208ENST00000527680 LOC100653049A0A140TA62 436 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 PLSCR5A0PG75 271 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 CLDN25C9JDP6 229 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 SPRY3O43610 288 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 KRT34O76011 436 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 PNPP00491 289 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 NPPAP01160 153 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 IGF2P01344 180 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 IGHV3-13P01766 116 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 THRBP10828 461 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 ZNF133P52736 654 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 ERVK-25P63136 954 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 ST3GAL3Q11203 375 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 CYBRD1Q53TN4 286 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 ALDH16A1Q8IZ83 802 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 LIPHQ8WWY8 451 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 RAB1CQ92928 201 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 ZNF583Q96ND8 569 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 SMURF2Q9HAU4 748 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 MRGBPQ9NV56 204 aa19.07■□□□□ 0.64
TRAPPC4-208ENST00000527680 GMNCA6NCL1 334 aa19.06■□□□□ 0.64
TRAPPC4-208ENST00000527680 TROVE2P10155 538 aaKnown RBP eCLIP19.06■□□□□ 0.64
TRAPPC4-208ENST00000527680 IFI30P13284 250 aa19.06■□□□□ 0.64
TRAPPC4-208ENST00000527680 KDELR2P33947 212 aa19.06■□□□□ 0.64
TRAPPC4-208ENST00000527680 PSG4Q00888 419 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms