RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 EMDP50402 254 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 PLA2G16P53816 162 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 CDH12P55289 794 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 UCP2P55851 309 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 DSCR4P56555 118 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 RPS13P62277 151 aaKnown RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 GNGT1P63211 74 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 DLK1P80370 383 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 PAX2Q02962 417 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 CHRNB3Q05901 458 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 STX4Q12846 297 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 SCGB2A2Q13296 93 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 EFTUD2Q15029 972 aaKnown RBP eCLIP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF239Q16600 458 aaKnown RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF260Q3ZCT1 412 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 IFI44LQ53G44 452 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 LBHQ53QV2 105 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 CT45A2Q5DJT8 189 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 AGBL2Q5U5Z8 902 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 LRRC38Q5VT99 294 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 PRAMEF8Q5VWM4 474 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 PTRHD1Q6GMV3 140 aaKnown RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 UGT2A3Q6UWM9 527 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 NPSR1Q6W5P4 371 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 C17orf107Q6ZR85 190 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 Q6ZSV7 163 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 CCDC121Q6ZUS5 278 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 ZER1Q7Z7L7 766 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 CPNE9Q8IYJ1 553 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 ELMOD2Q8IZ81 293 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 SYCE1Q8N0S2 351 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 GCSAMQ8N6F7 178 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 GBP7Q8N8V2 638 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 ACOT4Q8N9L9 421 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 TRPV3Q8NET8 790 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 WFDC9Q8NEX5 89 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 OR52N5Q8NH56 324 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 OSR1Q8TAX0 266 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 ACTRT1Q8TDG2 376 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 SKA2Q8WVK7 121 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 SLC5A11Q8WWX8 675 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 SLC25A28Q96A46 364 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 BSCL2Q96G97 398 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 ATP6V1G3Q96LB4 118 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 TSNARE1Q96NA8 513 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 FOPNLQ96NB1 174 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 F2RL3Q96RI0 385 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 CHP1Q99653 195 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 PSD2Q9BQI7 771 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 HAUS8Q9BT25 410 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 TRMOQ9BU70 441 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 C1QTNF6Q9BXI9 259 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 CHIAQ9BZP6 476 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 PCBD2Q9H0N5 130 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 STMN4Q9H169 189 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 KCNN2Q9H2S1 579 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 DSN1Q9H410 356 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 METTL7AQ9H8H3 244 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 COQ10BQ9H8M1 238 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 PELI2Q9HAT8 420 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 BEX1Q9HBH7 125 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 BATF3Q9NR55 127 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 FAM118AQ9NWS6 357 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 OR6C3Q9NZP0 311 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 MED11Q9P086 117 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 COPS7AQ9UBW8 275 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 NUP50Q9UKX7 468 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 GPR132Q9UNW8 380 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 MGAT4BQ9UQ53 548 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 DHRS7Q9Y394 339 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 STRAPQ9Y3F4 350 aaKnown RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 ASB4Q9Y574 426 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 AP4B1Q9Y6B7 739 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 U3KQK5 164 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 IGHV1-18A0A0C4DH31 117 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 MACROD2A1Z1Q3 448 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 GMNCA6NCL1 334 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 C5orf51A6NDU8 294 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 FAM90A10PA6NDY2 464 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 CFAP73A6NFT4 308 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 OR6C70A6NIJ9 312 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SRRM5B3KS81 715 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 GOLGA8TH3BQL2 631 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 ANGPT2O15123 496 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SPINT2O43291 252 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 XRCC3O43542 346 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 CDH16O75309 829 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 CRCPO75575 148 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 MPZL1O95297 269 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 IGHV2-5P01817 119 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 CSN3P07498 182 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 OR4A8P0C604 315 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SAGP10523 405 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 ETS1P14921 441 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 AREGP15514 252 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 GABRA5P31644 462 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SSR1P43307 286 aaKnown RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SLC9A3P48764 834 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 TTPAP49638 278 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms