RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 C17orf82Q86X59 251 aaPredicted RBP5.6□□□□□ -1.51
LSM1-202ENST00000520286 IQCF2Q8IXL9 164 aa5.6□□□□□ -1.51
LSM1-202ENST00000520286 OR1L6Q8NGR2 347 aa5.6□□□□□ -1.51
LSM1-202ENST00000520286 RHOXF1Q8NHV9 184 aa5.6□□□□□ -1.51
LSM1-202ENST00000520286 STMN2Q93045 179 aa5.6□□□□□ -1.51
LSM1-202ENST00000520286 CDC42EP4Q9H3Q1 356 aaKnown RBP5.6□□□□□ -1.51
LSM1-202ENST00000520286 RBKSQ9H477 322 aa5.6□□□□□ -1.51
LSM1-202ENST00000520286 QPCTLQ9NXS2 382 aa5.6□□□□□ -1.51
LSM1-202ENST00000520286 NKIRAS1Q9NYS0 192 aa5.6□□□□□ -1.51
LSM1-202ENST00000520286 ABCG2Q9UNQ0 655 aa5.6□□□□□ -1.51
LSM1-202ENST00000520286 SNX24Q9Y343 169 aa5.6□□□□□ -1.51
LSM1-202ENST00000520286 TTC28Q96AY4 2481 aa5.6□□□□□ -1.51
LSM1-202ENST00000520286 PSME4Q14997 1843 aa5.6□□□□□ -1.51
LSM1-202ENST00000520286 VCANP13611 3396 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 A0A1B0GU03 582 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 SMIM23A6NLE4 172 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 DENRO43583 198 aaKnown RBP5.59□□□□□ -1.51
LSM1-202ENST00000520286 OXSR1O95747 527 aaPredicted RBP5.59□□□□□ -1.51
LSM1-202ENST00000520286 TTC4O95801 387 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 S100A1P23297 94 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 ADORA1P30542 326 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 HTR1FP30939 366 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 CALCRP30988 508 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 UGT1A3P35503 534 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 SLCO1A2P46721 670 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 ATP5OP48047 213 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 PLK1P53350 603 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 PRR4Q16378 134 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 AANATQ16613 207 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 SBK1Q52WX2 424 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 GSG1LQ6UXU4 331 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 H2AFVQ71UI9 128 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 PGAP1Q75T13 922 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 SKA3Q8IX90 412 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 PRELID2Q8N945 189 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 KLHL30-AS1Q8NEE0 82 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 FAM172AQ8WUF8 416 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 UFD1Q92890 307 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 NUS1Q96E22 293 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 SEC22AQ96IW7 307 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 DNAJC1Q96KC8 554 aaKnown RBP5.59□□□□□ -1.51
LSM1-202ENST00000520286 ZNF641Q96N77 438 aaPredicted RBP5.59□□□□□ -1.51
LSM1-202ENST00000520286 SIGLEC12Q96PQ1 595 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 GAL3ST1Q99999 423 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 RNF126Q9BV68 326 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 MRPS26Q9BYN8 205 aaKnown RBP5.59□□□□□ -1.51
LSM1-202ENST00000520286 PPA2Q9H2U2 334 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 GOLPH3Q9H4A6 298 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 PLGRKTQ9HBL7 147 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 NT5MQ9NPB1 228 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 IKZF2Q9UKS7 526 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 HEY1Q9Y5J3 304 aa5.59□□□□□ -1.51
LSM1-202ENST00000520286 MAST2Q6P0Q8 1798 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 IGLV8-61A0A075B6I0 122 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 MIF4GDA9UHW6 222 aaKnown RBP5.58□□□□□ -1.52
LSM1-202ENST00000520286 ANKRD63C9JTQ0 380 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 WWP2O00308 870 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 CDH16O75309 829 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 OR8U8P0C7N1 319 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 CALM1P0DP23 149 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 CALM2P0DP24 149 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 CALM3P0DP25 149 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 MCF2P10911 925 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 FASP25445 335 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 CRYBB2P43320 205 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 BIDP55957 195 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 CAV1Q03135 178 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 BCL2L1Q07817 233 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 MED21Q13503 144 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 OXA1LQ15070 435 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 EXOC3L4Q17RC7 722 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 GSG1Q2KHT4 349 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 BCL7AQ4VC05 210 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 CARD16Q5EG05 197 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 OR2B11Q5JQS5 317 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 PAGE2BQ5JRK9 111 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 ATAD3CQ5T2N8 411 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 FRA10AC1Q70Z53 315 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 GTSCR1Q86UQ5 136 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 LRRC6Q86X45 466 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 ERI1Q8IV48 349 aaKnown RBP5.58□□□□□ -1.52
LSM1-202ENST00000520286 GPR137CQ8N3F9 429 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 ZNF485Q8NCK3 441 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 OR2L3Q8NG85 312 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 DDI1Q8WTU0 396 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 PYROXD1Q8WU10 500 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 FAM151AQ8WW52 585 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.58□□□□□ -1.52
LSM1-202ENST00000520286 VSIG2Q96IQ7 327 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 MAPKAP1Q9BPZ7 522 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 KLHDC3Q9BQ90 382 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 THUMPD1Q9NXG2 353 aaKnown RBP5.58□□□□□ -1.52
LSM1-202ENST00000520286 TAS2R1Q9NYW7 299 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 UBQLN1Q9UMX0 589 aaKnown RBP5.58□□□□□ -1.52
LSM1-202ENST00000520286 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.58□□□□□ -1.52
LSM1-202ENST00000520286 RPL36Q9Y3U8 105 aaKnown RBP5.58□□□□□ -1.52
LSM1-202ENST00000520286 CSAG2Q9Y5P2 127 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 PEX16Q9Y5Y5 336 aa5.58□□□□□ -1.52
LSM1-202ENST00000520286 NFASCO94856 1347 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 ZNF532Q9HCE3 1301 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms