RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 KCNJ16Q9NPI9 418 aa15.64■□□□□ 0.09
SDC2-205ENST00000520233 TMEM38BQ9NVV0 291 aa15.64■□□□□ 0.09
SDC2-205ENST00000520233 CLN6Q9NWW5 311 aa15.64■□□□□ 0.09
SDC2-205ENST00000520233 NKX2-6A6NCS4 301 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 WIPF3A6NGB9 483 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 FAM171A2A8MVW0 826 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 LYZL6O75951 148 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 NPR2P20594 1047 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 PSMB1P20618 241 aaKnown RBP15.63■□□□□ 0.09
SDC2-205ENST00000520233 GUCA1AP43080 201 aaPredicted RBP15.63■□□□□ 0.09
SDC2-205ENST00000520233 TEKQ02763 1124 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 APOFQ13790 326 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 LINC01590Q5TEZ4 76 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 ANKRD16Q6P6B7 361 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 MYO7BQ6PIF6 2116 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 STAC2Q6ZMT1 411 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 MEPCEQ7L2J0 689 aaKnown RBP15.63■□□□□ 0.09
SDC2-205ENST00000520233 OR51L1Q8NGJ5 315 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 OR1K1Q8NGR3 316 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 FBLIM1Q8WUP2 373 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 APH1BQ8WW43 257 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 RFKQ969G6 155 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 LRRC46Q96FV0 321 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 Q96MT0 163 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 NELFAQ9H3P2 528 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 SEC61A2Q9H9S3 476 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 GALNT8Q9NY28 637 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 DNAJC27Q9NZQ0 273 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 AASSQ9UDR5 926 aa15.63■□□□□ 0.09
SDC2-205ENST00000520233 CFAP46Q8IYW2 2715 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 INTS1Q8N201 2190 aaKnown RBP15.62■□□□□ 0.09
SDC2-205ENST00000520233 CIB4A0PJX0 185 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 CCDC182A6NF36 153 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 SLC22A31A6NKX4 558 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 DENRO43583 198 aaKnown RBP15.62■□□□□ 0.09
SDC2-205ENST00000520233 ENTPD6O75354 484 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 AGFG2O95081 481 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 GAAP10253 952 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 FMO3P31513 532 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 CDAP32320 146 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 CDH11P55287 796 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 RPS7P62081 194 aaKnown RBP15.62■□□□□ 0.09
SDC2-205ENST00000520233 HSF2Q03933 536 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 FAM27E3Q08E93 113 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 TMED1Q13445 227 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 GABRA6Q16445 453 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 KCNMB1Q16558 191 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 LCN1P1Q5VSP4 162 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 OR7E24Q6IFN5 339 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 ZNF813Q6ZN06 617 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 BHLHA15Q7RTS1 189 aaPredicted RBP15.62■□□□□ 0.09
SDC2-205ENST00000520233 SLC22A24Q8N4F4 322 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 SLC26A10Q8NG04 563 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 BCL2L2Q92843 193 aaPredicted RBP15.62■□□□□ 0.09
SDC2-205ENST00000520233 RNASE6Q93091 150 aaKnown RBP15.62■□□□□ 0.09
SDC2-205ENST00000520233 KISS1RQ969F8 398 aaPredicted RBP15.62■□□□□ 0.09
SDC2-205ENST00000520233 NABP1Q96AH0 204 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 FOXN4Q96NZ1 517 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 TEAD3Q99594 435 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 SIAEQ9HAT2 523 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 POLE4Q9NR33 117 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 ALPK2Q86TB3 2170 aa15.62■□□□□ 0.09
SDC2-205ENST00000520233 SNTNA6NMZ2 147 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 WBP4O75554 376 aaKnown RBP15.61■□□□□ 0.09
SDC2-205ENST00000520233 RAD51DO75771 328 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 SEC14L2O76054 403 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 GPANK1O95872 356 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 TFP02787 698 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 HRGP04196 525 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 OR8G3PP0DMU2 310 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 B4GALT1P15291 398 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 MSR1P21757 451 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 HTR1FP30939 366 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 SRSF1Q07955 248 aaKnown RBP eCLIP15.61■□□□□ 0.09
SDC2-205ENST00000520233 CDK5R2Q13319 367 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 TSC22D1Q15714 1073 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 SGCAQ16586 387 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 FAM27BQ5VT28 67 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 C17orf78Q8N4C9 275 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 STEAP2Q8NFT2 490 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 OR6K6Q8NGW6 343 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 CNIH3Q8TBE1 160 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 OR10A4Q9H209 315 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 MARCH7Q9H992 704 aa15.61■□□□□ 0.09
SDC2-205ENST00000520233 WARS2Q9UGM6 360 aaKnown RBP15.61■□□□□ 0.09
SDC2-205ENST00000520233 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.61■□□□□ 0.09
SDC2-205ENST00000520233 SMG1Q96Q15 3661 aaKnown RBP15.6■□□□□ 0.09
SDC2-205ENST00000520233 SH3D21A4FU49 640 aa15.6■□□□□ 0.09
SDC2-205ENST00000520233 CLEC18AA5D8T8 446 aa15.6■□□□□ 0.09
SDC2-205ENST00000520233 C16orf97H3BN30 126 aa15.6■□□□□ 0.09
SDC2-205ENST00000520233 MPZL1O95297 269 aa15.6■□□□□ 0.09
SDC2-205ENST00000520233 FARS2O95363 451 aaKnown RBP15.6■□□□□ 0.09
SDC2-205ENST00000520233 HLA-DQA2P01906 255 aa15.6■□□□□ 0.09
SDC2-205ENST00000520233 SCG5P05408 212 aa15.6■□□□□ 0.09
SDC2-205ENST00000520233 HOXB1P14653 301 aaPredicted RBP15.6■□□□□ 0.09
SDC2-205ENST00000520233 IL32P24001 234 aa15.6■□□□□ 0.09
SDC2-205ENST00000520233 GSTT1P30711 240 aa15.6■□□□□ 0.09
SDC2-205ENST00000520233 UGT2B10P36537 528 aa15.6■□□□□ 0.09
SDC2-205ENST00000520233 LSM6P62312 80 aaKnown RBP15.6■□□□□ 0.09
SDC2-205ENST00000520233 TFF3Q07654 80 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms