RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 CPSF7Q8N684 471 aaKnown RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 CLDN22Q8N7P3 220 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 POC1AQ8NBT0 407 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 NFAM1Q8NET5 270 aaPredicted RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 OR2M7Q8NG81 312 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 OR2AK2Q8NG84 335 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 OR9Q2Q8NGE9 314 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 OR52I1Q8NGK6 324 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 OR10X1Q8NGY0 326 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 OR6K3Q8NGY3 331 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 OR4L1Q8NH43 312 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 OR10A6Q8NH74 314 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 RNASEH2CQ8TDP1 164 aaKnown RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 SAP25Q8TEE9 199 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 LRRC15Q8TF66 581 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 C16orf78Q8WTQ4 265 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 TMED6Q8WW62 240 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 SSMEM1Q8WWF3 244 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 C11orf40Q8WZ69 217 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 TFGQ92734 400 aaPredicted RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 ATOH1Q92858 354 aaPredicted RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 RPEQ96AT9 228 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 EXOSC8Q96B26 276 aaKnown RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 YIPF6Q96EC8 236 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 ZHX1-C8orf76Q96EF9 292 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 WDR34Q96EX3 536 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 MRPL48Q96GC5 212 aaKnown RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 CENPNQ96H22 339 aaPredicted RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 PPP1R2P1Q96PQ5 205 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 GFM1Q96RP9 751 aaKnown RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 S1PR3Q99500 378 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 SLC6A7Q99884 636 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 ARL6Q9H0F7 186 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 CPVLQ9H3G5 476 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 RNF41Q9H4P4 317 aaPredicted RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 ARMC7Q9H6L4 198 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 DDX31Q9H8H2 851 aaKnown RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 UGT1A8Q9HAW9 530 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 SEBOXQ9HB31 216 aaPredicted RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 NMRAL1Q9HBL8 299 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 TMBIM4Q9HC24 238 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 C6orf50Q9HD87 102 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 TIGARQ9NQ88 270 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 NLE1Q9NVX2 485 aaPredicted RBP2.32□□□□□ -2.04
PABPC1-211ENST00000519596 GSKIPQ9P0R6 139 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 SEC14L4Q9UDX3 406 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 NDRG3Q9UGV2 375 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 ZNF391Q9UJN7 358 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 ALG5Q9Y673 324 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 MTCH2Q9Y6C9 303 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 ABCB11O95342 1321 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 FAM135BQ49AJ0 1406 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 PTPRUQ92729 1446 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 NISCHQ9Y2I1 1504 aa2.32□□□□□ -2.04
PABPC1-211ENST00000519596 VIRMAQ69YN4 1812 aaKnown RBP2.31□□□□□ -2.04
PABPC1-211ENST00000519596 TRAV8-7A0A075B6U6 113 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 A0A096LPK6 155 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 hCG_38984A0A1B0GV85 526 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 A0A1B0GV90 55 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 ATP6AP2A0A1C7CYW4 349 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 A0A1W2PPV9 198 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 LRP5LA4QPB2 252 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 CASTOR2A6NHX0 329 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 YJEFN3A6XGL0 299 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 RNF212BA8MTL3 300 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 C21orf140B9A014 251 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 CXCR6O00574 342 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 NTN3O00634 580 aaPredicted RBP2.31□□□□□ -2.04
PABPC1-211ENST00000519596 EPHB6O15197 1021 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 UBDO15205 165 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 TAPBPO15533 448 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 ZNF749O43361 778 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 PSTPIP1O43586 416 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 RAD1O60671 282 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 KHDRBS3O75525 346 aaKnown RBP2.31□□□□□ -2.04
PABPC1-211ENST00000519596 BANF1O75531 89 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 KRT33AO76009 404 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 DIRAS1O95057 198 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 PPP1R3DO95685 299 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 RAB36O95755 333 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 EML2O95834 649 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 HPRP00739 348 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 THY1P04216 161 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 GAPDHP04406 335 aaKnown RBP2.31□□□□□ -2.04
PABPC1-211ENST00000519596 P04436 131 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 PCCAP05165 728 aaPredicted RBP2.31□□□□□ -2.04
PABPC1-211ENST00000519596 BCHEP06276 602 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 OR8U9P0C7N5 309 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 AOC1P19801 751 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 PGCP20142 388 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 HRH2P25021 359 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 F2RP25116 425 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 FASP25445 335 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 GDF1P27539 372 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 SRD5A2P31213 254 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 RPL5P46777 297 aaKnown RBP2.31□□□□□ -2.04
PABPC1-211ENST00000519596 HTR5AP47898 357 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 AMTP48728 403 aa2.31□□□□□ -2.04
PABPC1-211ENST00000519596 METAP2P50579 478 aaKnown RBP eCLIP2.31□□□□□ -2.044e-10■■■□□ 17.7
PABPC1-211ENST00000519596 HLCSP50747 726 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms