RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 NSMAFQ92636 917 aa12.45□□□□□ -0.42
SDC2-203ENST00000519587 KISS1RQ969F8 398 aaPredicted RBP12.45□□□□□ -0.42
SDC2-203ENST00000519587 MUS81Q96NY9 551 aa12.45□□□□□ -0.42
SDC2-203ENST00000519587 FOXB1Q99853 325 aa12.45□□□□□ -0.42
SDC2-203ENST00000519587 USB1Q9BQ65 265 aaKnown RBP12.45□□□□□ -0.42
SDC2-203ENST00000519587 HDHD5Q9BXW7 423 aa12.45□□□□□ -0.42
SDC2-203ENST00000519587 OR51V1Q9H2C8 321 aa12.45□□□□□ -0.42
SDC2-203ENST00000519587 SRA1Q9HD15 236 aaKnown RBP12.45□□□□□ -0.42
SDC2-203ENST00000519587 RASSF1Q9NS23 344 aa12.45□□□□□ -0.42
SDC2-203ENST00000519587 GALNT8Q9NY28 637 aa12.45□□□□□ -0.42
SDC2-203ENST00000519587 JKAMPQ9P055 326 aa12.45□□□□□ -0.42
SDC2-203ENST00000519587 CLEC18AA5D8T8 446 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 CLDN14O95500 239 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 CLIC3O95833 236 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 HLA-DQA2P01906 255 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 NPR2P20594 1047 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 MYF6P23409 242 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 LAP3P28838 519 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 FMO3P31513 532 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 CD79BP40259 229 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 CDH11P55287 796 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 MRPS34P82930 218 aaKnown RBP12.44□□□□□ -0.42
SDC2-203ENST00000519587 EFNB1P98172 346 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 TMED1Q13445 227 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 APOFQ13790 326 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 MAD2L1BPQ15013 274 aaPredicted RBP12.44□□□□□ -0.42
SDC2-203ENST00000519587 OCLNQ16625 522 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 FBXL19-AS1Q494R0 122 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 C1QTNF12Q5T7M4 302 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 KRT80Q6KB66 452 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 ANKRD16Q6P6B7 361 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 KLHL24Q6TFL4 600 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 CLEC18BQ6UXF7 455 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 LINGO2Q7L985 606 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 CXorf67Q86X51 503 aaPredicted RBP12.44□□□□□ -0.42
SDC2-203ENST00000519587 LIX1LQ8IVB5 337 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 OR6V1Q8N148 313 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 C17orf78Q8N4C9 275 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 CLEC18CQ8NCF0 446 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 OR10H5Q8NGA6 315 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 RHOXF1Q8NHV9 184 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 ITLN2Q8WWU7 325 aaPredicted RBP12.44□□□□□ -0.42
SDC2-203ENST00000519587 NANOS1Q8WY41 292 aaKnown RBP12.44□□□□□ -0.42
SDC2-203ENST00000519587 TSSK2Q96PF2 358 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 DDOQ99489 341 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 NELFAQ9H3P2 528 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 MED20Q9H944 212 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 SEC61A2Q9H9S3 476 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 TMEM38BQ9NVV0 291 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 DNAJC27Q9NZQ0 273 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.44□□□□□ -0.42
SDC2-203ENST00000519587 B9D1Q9UPM9 204 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 POLR1DQ9Y2S0 133 aa12.44□□□□□ -0.42
SDC2-203ENST00000519587 SPTBN1Q01082 2364 aaKnown RBP12.43□□□□□ -0.42
SDC2-203ENST00000519587 NBPF19A0A087WUL8 3843 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 SH3D21A4FU49 640 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 DCTN6O00399 190 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 LYZL6O75951 148 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 GLCEO94923 617 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 GYPBP06028 91 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 ITGA5P08648 1049 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 OR8G3PP0DMU2 310 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 PSMB1P20618 241 aaKnown RBP12.43□□□□□ -0.42
SDC2-203ENST00000519587 MSR1P21757 451 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 IGHV1-2P23083 117 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 PYCR1P32322 319 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 ARF1P84077 181 aaKnown RBP12.43□□□□□ -0.42
SDC2-203ENST00000519587 POU4F2Q12837 409 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 C9orf135Q5VTT2 229 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 AADACL4Q5VUY2 407 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 ZNF474Q6S9Z5 364 aaPredicted RBP12.43□□□□□ -0.42
SDC2-203ENST00000519587 ZNF813Q6ZN06 617 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 MEPCEQ7L2J0 689 aaKnown RBP12.43□□□□□ -0.42
SDC2-203ENST00000519587 ZNF627Q7L945 461 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 BHLHA15Q7RTS1 189 aaPredicted RBP12.43□□□□□ -0.42
SDC2-203ENST00000519587 SSX8Q7RTT4 187 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 DPPA2Q7Z7J5 298 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 CCDC36Q8IYA8 594 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 ZNF433Q8N7K0 673 aaPredicted RBP12.43□□□□□ -0.42
SDC2-203ENST00000519587 STEAP2Q8NFT2 490 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 OR1K1Q8NGR3 316 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 RNASE6Q93091 150 aaKnown RBP12.43□□□□□ -0.42
SDC2-203ENST00000519587 CNBD2Q96M20 576 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 ZNF582Q96NG8 517 aaPredicted RBP12.43□□□□□ -0.42
SDC2-203ENST00000519587 PSMG3-AS1Q96PY0 264 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 HCAR1Q9BXC0 346 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 OR10A4Q9H209 315 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 KCNN2Q9H2S1 579 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 ZNF226Q9NYT6 803 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 WARS2Q9UGM6 360 aaKnown RBP12.43□□□□□ -0.42
SDC2-203ENST00000519587 KCNG2Q9UJ96 466 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 COA3Q9Y2R0 106 aaPredicted RBP12.43□□□□□ -0.42
SDC2-203ENST00000519587 UGT2A1Q9Y4X1 527 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 DOPEY1Q5JWR5 2465 aa12.43□□□□□ -0.42
SDC2-203ENST00000519587 IGKV1D-43A0A0B4J1Z2 117 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 C16orf97H3BN30 126 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 RAD51DO75771 328 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 HRGP04196 525 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 CLUP10909 449 aa12.42□□□□□ -0.42
SDC2-203ENST00000519587 B4GALT1P15291 398 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms