RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ADPRHL1Q8NDY3 354 aa12.92□□□□□ -0.34
CLN8-204ENST00000519254 ABHD4Q8TB40 342 aa12.92□□□□□ -0.34
CLN8-204ENST00000519254 MRPL48Q96GC5 212 aaKnown RBP12.92□□□□□ -0.34
CLN8-204ENST00000519254 ADAD1Q96M93 576 aaKnown RBP12.92□□□□□ -0.34
CLN8-204ENST00000519254 INTS14Q96SY0 518 aa12.92□□□□□ -0.34
CLN8-204ENST00000519254 EXO5Q9H790 373 aa12.92□□□□□ -0.34
CLN8-204ENST00000519254 ACOXLQ9NUZ1 547 aa12.92□□□□□ -0.34
CLN8-204ENST00000519254 NPIPA1Q9UND3 350 aa12.92□□□□□ -0.34
CLN8-204ENST00000519254 HDGFL3Q9Y3E1 203 aa12.92□□□□□ -0.34
CLN8-204ENST00000519254 LIPGQ9Y5X9 500 aa12.92□□□□□ -0.34
CLN8-204ENST00000519254 ZNF814B7Z6K7 855 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 H0YC42 278 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 SULT2B1O00204 365 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 PSMD9O00233 223 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 TNFSF11O14788 317 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 SC5DO75845 299 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 ITGB2P05107 769 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 S100A5P33763 92 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 DAP3P51398 398 aaKnown RBP12.91□□□□□ -0.34
CLN8-204ENST00000519254 GFRA1P56159 465 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 HNRNPA0Q13151 305 aaKnown RBP12.91□□□□□ -0.34
CLN8-204ENST00000519254 SLC10A1Q14973 349 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 TRAM1Q15629 374 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 Q6ZS92 163 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 OR6N2Q8NGY6 317 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 NEIL3Q8TAT5 605 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 SNRNP27Q8WVK2 155 aaKnown RBP12.91□□□□□ -0.34
CLN8-204ENST00000519254 GHSRQ92847 366 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 KLHL15Q96M94 604 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 FOXN4Q96NZ1 517 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 KCNK17Q96T54 332 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 PPIL3Q9H2H8 161 aaKnown RBP12.91□□□□□ -0.34
CLN8-204ENST00000519254 LDAHQ9H6V9 325 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 SMURF1Q9HCE7 757 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 MRPL22Q9NWU5 206 aaKnown RBP12.91□□□□□ -0.34
CLN8-204ENST00000519254 MED29Q9NX70 200 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 CRNNQ9UBG3 495 aaPredicted RBP12.91□□□□□ -0.34
CLN8-204ENST00000519254 TRAPPC4Q9Y296 219 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 B3GNT3Q9Y2A9 372 aa12.91□□□□□ -0.34
CLN8-204ENST00000519254 IQCMA0A1B0GVH7 501 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 SMIM30A4D0T7 59 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 GJE1A6NN92 205 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 EIF1AYO14602 144 aaKnown RBP12.9□□□□□ -0.34
CLN8-204ENST00000519254 ALOX5APP20292 161 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 PSMB10P40306 273 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 RPS27P42677 84 aaKnown RBP12.9□□□□□ -0.34
CLN8-204ENST00000519254 CLDN20P56880 219 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 ZNF239Q16600 458 aaKnown RBP12.9□□□□□ -0.34
CLN8-204ENST00000519254 CCDC58Q4VC31 144 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 RPL22L1Q6P5R6 122 aaKnown RBP12.9□□□□□ -0.34
CLN8-204ENST00000519254 PLEKHG7Q6ZR37 379 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 DPY19L4Q7Z388 723 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 RPS4Y2Q8TD47 263 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 MIB2Q96AX9 1013 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 SMIM19Q96E16 107 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 MNTQ99583 582 aa12.9□□□□□ -0.34
CLN8-204ENST00000519254 MRM2Q9UI43 246 aaKnown RBP12.9□□□□□ -0.34
CLN8-204ENST00000519254 A0A0J9YW62 118 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 TMEM8BA6NDV4 472 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 CASKO14936 926 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 ABHD16AO95870 558 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 CD1AP06126 327 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 KLK2P20151 261 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 GDI2P50395 445 aaKnown RBP12.89□□□□□ -0.35
CLN8-204ENST00000519254 CAV3P56539 151 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 SRYQ05066 204 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 OTPQ5XKR4 325 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 FAM205BPQ63HN1 556 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 TMPPEQ6ZT21 453 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 TRILQ7L0X0 811 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 KCTD20Q7Z5Y7 419 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 CCDC190Q86UF4 302 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 MS4A15Q8N5U1 240 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 KCNN2Q9H2S1 579 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 KLHL13Q9P2N7 655 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 LAMP5Q9UJQ1 280 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 ING1Q9UK53 422 aaPredicted RBP12.89□□□□□ -0.35
CLN8-204ENST00000519254 PTPRQQ9UMZ3 2332 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 MGAQ8IWI9 3026 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 TRBV2A0A0J9YWF9 115 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 ZNF593O00488 134 aaPredicted RBP12.89□□□□□ -0.35
CLN8-204ENST00000519254 RAMP1O60894 148 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 UPK3AO75631 287 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 PMS2P2O95744 297 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 OR8G3PP0DMU2 310 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 EDNRAP25101 427 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 CRABP1P29762 137 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 PTGS2P35354 604 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 ETV6P41212 452 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 CENPAP49450 140 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 BLVRAP53004 296 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 PPP5CP53041 499 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 BIDP55957 195 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 SLC35A1P78382 337 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 IFITM3Q01628 133 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 FMODQ06828 376 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 LINC00303Q3SY05 128 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 PLEKHN1Q494U1 663 aaPredicted RBP12.89□□□□□ -0.35
CLN8-204ENST00000519254 FAM27D1Q5T7N8 215 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 CEACAM19Q7Z692 300 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms