RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SERGEFQ9UGK8 458 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 EMC9Q9Y3B6 208 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 ADAM18Q9Y3Q7 739 aa9.91□□□□□ -0.82
PCDHGA1-202ENST00000517417 GREB1Q4ZG55 1949 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 ZNF318Q5VUA4 2279 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 CACNA1IQ9P0X4 2223 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 MEIKINA0A087WXM9 373 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 SMCO3A2RU48 225 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 TMEM229AB2RXF0 380 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 RAB40ALP0C0E4 278 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 SRMP19623 302 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 MMP15P51511 669 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 AGBL4Q5VU57 503 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 UNQ6126/PRO20091Q6UXV3 157 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 MEX3BQ6ZN04 569 aaKnown RBP9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 PXKQ7Z7A4 578 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 RAB40AQ8WXH6 277 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 ORAI1Q96D31 301 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 EMC6Q9BV81 110 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLC22A7Q9Y694 548 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 DIDO1Q9BTC0 2240 aaKnown RBP9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 SLC2A1P11166 492 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 ATF1P18846 271 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 CD53P19397 219 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 RPS27P42677 84 aaKnown RBP9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 RPL35P42766 123 aaKnown RBP9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 EPHA4P54764 986 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 HSD17B7P56937 341 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 NKAIN1Q4KMZ8 207 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 LILRA6Q6PI73 481 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 TMEM91Q6ZNR0 172 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 BPHLQ86WA6 291 aaPredicted RBP9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 GRAMD2AQ8IUY3 354 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 GLB1L2Q8IW92 636 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 PM20D2Q8IYS1 436 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 PATJQ8NI35 1801 aa9.9□□□□□ -0.82
PCDHGA1-202ENST00000517417 LINC00862A6NCI5 91 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 E9PI62 339 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 SELENOFO60613 162 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 OR8U9P0C7N5 309 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 EPXP11678 715 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 DYRK1AQ13627 763 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 RBM39Q14498 530 aaKnown RBP9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 ARL6IP1Q15041 203 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 MLC1Q15049 377 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 GSG1Q2KHT4 349 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 PLA1AQ53H76 456 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 TMEM215Q68D42 235 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 ZNF793Q6ZN11 406 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 GTPBP8Q8N3Z3 284 aaPredicted RBP9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 OR1J4Q8NGS1 313 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 MRI1Q9BV20 369 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 C1orf198Q9H425 327 aa9.9□□□□□ -0.83
PCDHGA1-202ENST00000517417 A0A1W2PPC1 479 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 ANKRD61A6NGH8 418 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 GABARAPH6UMI1 98 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 MRPL33O75394 65 aaKnown RBP9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 GALP22466 123 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 ADH6P28332 368 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 Q6ZS52 159 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 TMUB2Q71RG4 321 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 PRSS42Q7Z5A4 293 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 DEFB123Q8N688 67 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 LYRM4Q9HD34 91 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 KCNIP1Q9NZI2 227 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 PADI1Q9ULC6 663 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 SF3B6Q9Y3B4 125 aaKnown RBP9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 PCDHGA1Q9Y5H4 931 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 TRAV36DV7A0A075B6V5 113 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 AGPAT2O15120 278 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 GIPP09681 153 aaPredicted RBP9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 ACSM4P0C7M7 580 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 GAAP10253 952 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 MYF5P13349 255 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 ZNF44P15621 663 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 TCN2P20062 427 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 GFERP55789 205 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 MC2RQ01718 297 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 RBMS2Q15434 407 aaKnown RBP9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 DCAF12Q5T6F0 453 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 OTPQ5XKR4 325 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 OVCH1Q7RTY7 1134 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 BPIFB2Q8N4F0 458 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 C17orf47Q8NEP4 570 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 OR9K2Q8NGE7 335 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 OR51D1Q8NGF3 324 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 OR5M1Q8NGP8 315 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 SCARB1Q8WTV0 552 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 SMIM4Q8WVI0 70 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 DERL3Q96Q80 235 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 MRPS18AQ9NVS2 196 aaKnown RBP9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 FBXL2Q9UKC9 423 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 ELF5Q9UKW6 265 aaPredicted RBP9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 EP300Q09472 2414 aaPredicted RBP9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 A0A1B0GX78 115 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 RGS11O94810 467 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 IFNA5P01569 189 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 EPHA1P21709 976 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 HTR2AP28223 471 aa9.89□□□□□ -0.83
PCDHGA1-202ENST00000517417 APLNRP35414 380 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms