RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ZNF570Q96NI8 536 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 SH3GL3Q99963 347 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 WACQ9BTA9 647 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 KCNN2Q9H2S1 579 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 PLK3Q9H4B4 646 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 TMCC3Q9ULS5 477 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 UGT2A1Q9Y4X1 527 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 IGKV1D-43A0A0B4J1Z2 117 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 SLC22A23A1A5C7 686 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 H7C1Q1 480 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 STAMBPO95630 424 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 SNAP29O95721 258 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 TXNDC12O95881 172 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 MMP7P09237 267 aaPredicted RBP11.05□□□□□ -0.64
CLCN3-210ENST00000515420 CSF3P09919 207 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 OR4A8P0C604 315 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 RRM2P31350 389 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 EVX1P49640 407 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 PPOXP50336 477 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 RIPPLY3P57055 190 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 ERVK-25P63136 954 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 GALK2Q01415 458 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 PLP2Q04941 152 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 FMODQ06828 376 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 SNTB2Q13425 540 aaKnown RBP11.05□□□□□ -0.64
CLCN3-210ENST00000515420 GK3PQ14409 553 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 RAB39AQ14964 217 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 DNAL1Q4LDG9 190 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 MESTQ5EB52 335 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 FAM27BQ5VT28 67 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 SMARCD3Q6STE5 483 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 CYP2R1Q6VVX0 501 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 DPY19L2P2Q6ZN68 376 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 ZER1Q7Z7L7 766 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 ADCK1Q86TW2 530 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 ZNF584Q8IVC4 421 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 OR1J2Q8NGS2 313 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 FGFBP3Q8TAT2 258 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 NABP1Q96AH0 204 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 FBXO17Q96EF6 278 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 RNF121Q9H920 327 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 SLC7A8Q9UHI5 535 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 GDF2Q9UK05 429 aaPredicted RBP11.05□□□□□ -0.64
CLCN3-210ENST00000515420 ADAM18Q9Y3Q7 739 aa11.05□□□□□ -0.64
CLCN3-210ENST00000515420 IQCMA0A1B0GVH7 501 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 PRSS37A4D1T9 235 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 TRIM64A6NGJ6 449 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 TRIM64BA6NI03 449 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 OR10H3O60404 316 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 NDUFS7O75251 213 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 CST2P09228 141 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 THBS4P35443 961 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 GLRXP35754 106 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 RPS6KA3P51812 740 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 EFNA4P52798 201 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 NUDT6P53370 316 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 FXYD6P3P58550 94 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 PCBD1P61457 104 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 MS4A2Q01362 244 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 TRAP1Q12931 704 aaKnown RBP11.04□□□□□ -0.64
CLCN3-210ENST00000515420 KRR1Q13601 381 aaKnown RBP11.04□□□□□ -0.64
CLCN3-210ENST00000515420 TBC1D28Q2M2D7 210 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 FAM98BQ52LJ0 330 aaKnown RBP11.04□□□□□ -0.64
CLCN3-210ENST00000515420 C1orf94Q6P1W5 598 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 SLC30A7Q8NEW0 376 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 NSMAFQ92636 917 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 Q96M85 177 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 TRIM15Q9C019 465 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 LRMDAQ9H2I8 198 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 MYOZ1Q9NP98 299 aaPredicted RBP11.04□□□□□ -0.64
CLCN3-210ENST00000515420 CCNB1IP1Q9NPC3 277 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 VSX1Q9NZR4 365 aaPredicted RBP11.04□□□□□ -0.64
CLCN3-210ENST00000515420 CMAHPQ9Y471 501 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 LYVE1Q9Y5Y7 322 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 FKBP7Q9Y680 259 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 C2CD3Q4AC94 2353 aa11.04□□□□□ -0.64
CLCN3-210ENST00000515420 CHD3Q12873 2000 aaKnown RBP11.03□□□□□ -0.64
CLCN3-210ENST00000515420 TEX13CA0A0J9YWL9 993 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 IMPA2O14732 288 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 ACOT8O14734 319 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 ARPC3O15145 178 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 UBOX5O94941 541 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 F12P00748 615 aaPredicted RBP11.03□□□□□ -0.64
CLCN3-210ENST00000515420 PATE4P0C8F1 98 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 MSR1P21757 451 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 PCSK6P29122 969 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 SLC6A6P31641 620 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 CDAP32320 146 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 GSSP48637 474 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 TSPAN31Q12999 210 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 TNK1Q13470 666 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 KRT80Q6KB66 452 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 RPL13AP3Q6NVV1 102 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 VHLLQ6RSH7 139 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 THSD4Q6ZMP0 1018 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 SYT9Q86SS6 491 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 LRRC18Q8N456 261 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 CLDN22Q8N7P3 220 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 OR10H5Q8NGA6 315 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 FANK1Q8TC84 345 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms