RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 RHBDD3Q9Y3P4 386 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 HEY1Q9Y5J3 304 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 FADS3Q9Y5Q0 445 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 AUP1Q9Y679 476 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 A0A075B6Q4 140 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 IGHV3-35A0A0C4DH35 117 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 C9orf170A2RU37 121 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 LRIT2A6NDA9 550 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 RNASEK-C17orf49H0YIS7 233 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 PGRMC1O00264 195 aaKnown RBP1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 ZNF195O14628 629 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 EIF3HO15372 352 aaKnown RBP eCLIP1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 B4GALT5O43286 388 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 GPAA1O43292 621 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 LATO43561 262 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 DUSP11O75319 330 aaKnown RBP1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 NEBLO76041 1014 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 RPP14O95059 124 aaKnown RBP1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 APOA1P02647 267 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 IGFBP1P08833 259 aaPredicted RBP1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 UMPSP11172 480 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 RNH1P13489 461 aaKnown RBP1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 FOLR1P15328 257 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 ATF6P18850 670 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 ACLYP53396 1101 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 HMGCS2P54868 508 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 KRTAP10-5P60370 271 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 AP1S1P61966 158 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 RPS4XP62701 263 aaKnown RBP1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 SLC7A9P82251 487 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 RIPPLY1Q0D2K3 151 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 APOFQ13790 326 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 RCAN2Q14206 197 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 ELAVL3Q14576 367 aaKnown RBP1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 ZMYND11Q15326 602 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 USF2Q15853 346 aaPredicted RBP1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 PPP1R3AQ16821 1122 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 TATDN3Q17R31 274 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 KCTD21Q4G0X4 260 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 HIGD2BQ4VC39 106 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 PIGGQ5H8A4 983 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 FAM120AOSQ5T036 256 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 SPINK14Q6IE38 97 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 CLVS1Q8IUQ0 354 aaPredicted RBP1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 SPEM1Q8N4L4 309 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 SAMD12Q8N8I0 201 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 LEMD2Q8NC56 503 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 OR10T2Q8NGX3 314 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 NANPQ8TBE9 248 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 FAM151AQ8WW52 585 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 ITLN1Q8WWA0 313 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 DNAJB3Q8WWF6 145 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 ESR2Q92731 530 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 SLC35E1Q96K37 410 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 VSTM2LQ96N03 204 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 NIPSNAP3BQ9BS92 247 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 FUNDC2Q9BWH2 189 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 HCAR1Q9BXC0 346 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 BBS2Q9BXC9 721 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 ZYG11BQ9C0D3 744 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 BLZF1Q9H2G9 400 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 SYNDIG1Q9H7V2 258 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 NRN1Q9NPD7 142 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 BATF3Q9NR55 127 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 MGAT4BQ9UQ53 548 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 SSPOA2VEC9 5147 aa1.27□□□□□ -2.21
AC025539.1-201ENST00000515343 HELTA6NFD8 242 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 SMCO2A6NFE2 343 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 TMEM238C9JI98 176 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 COCHO43405 550 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 CTNSO60931 367 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 CNMDO75829 334 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 IGSF6O95976 241 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 IFNA14P01570 189 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 IFNGP01579 166 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 FCGR3AP08637 254 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 KRT16P08779 473 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 TACSTD2P09758 323 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 UBTFL1P0CB47 393 aaPredicted RBP1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 CALB2P22676 271 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 MAS1LP35410 378 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 NUDT1P36639 197 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 RANBP1P43487 201 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 CXCR4P61073 352 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 CCL7P80098 99 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 SEMG2Q02383 582 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 PEX6Q13608 980 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 SERTAD2Q14140 314 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 COQ5Q5HYK3 327 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 MLIPQ5VWP3 458 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 NCR3LG1Q68D85 454 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 REP15Q6BDI9 236 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 DMKNQ6E0U4 476 aaPredicted RBP1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 RAET1GQ6H3X3 334 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 OR6B2Q6IFH4 312 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 STEAP1BQ6NZ63 245 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 HACD2Q6Y1H2 254 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 WDR88Q6ZMY6 472 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 GTSCR1Q86UQ5 136 aa1.26□□□□□ -2.21
AC025539.1-201ENST00000515343 SERPINA9Q86WD7 417 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms