RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 NUP58Q9BVL2 599 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 RACGAP1Q9H0H5 632 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 IKBKGQ9Y6K9 419 aa3.05□□□□□ -1.92
HMGCS1-207ENST00000514610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 ZNF816-ZNF321PA0A0X1KG74 233 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 A0A1B0GVX0 72 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 FAM47DPA6NHR8 397 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 DYNC1I1O14576 645 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 AIREO43918 545 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 ENTPD5O75356 428 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 MAS1LP35410 378 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 ACLYP53396 1101 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 KRTAP10-8P60410 259 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 ECH1Q13011 328 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 LY6G6FQ5SQ64 297 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 DNAJC24Q6P3W2 148 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 CCDC73Q6ZRK6 1079 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 OR4S2Q8NH73 311 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 N4BP2L2Q92802 583 aaPredicted RBP3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 EXOSC8Q96B26 276 aaKnown RBP3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 RASD2Q96D21 266 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 PKNOX2Q96KN3 472 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 OR2A5Q96R48 311 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 SLC29A1Q99808 456 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 ILKAPQ9H0C8 392 aaPredicted RBP3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 LINC00597Q9H2U6 94 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 OR51M1Q9H341 326 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 ANKRA2Q9H9E1 313 aa3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 RRP15Q9Y3B9 282 aaKnown RBP3.04□□□□□ -1.92
HMGCS1-207ENST00000514610 IGHV5-51A0A0C4DH38 117 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 RAB29O14966 203 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 DPM1O60762 260 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 FABP3P05413 133 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 ANXA5P08758 320 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 CDKN2BP42772 138 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 CYB561P49447 251 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 ZNF138P52744 262 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 PRMT2P55345 433 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 SLC25A11Q02978 314 aaKnown RBP3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 EIF4EBP1Q13541 118 aaPredicted RBP3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 PRPSAP1Q14558 356 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 CLINT1Q14677 625 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 PPP1R7Q15435 360 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 XKR7Q5GH72 579 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 CCDC183Q5T5S1 534 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 PRAMEF20Q5VT98 475 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 IGFL3Q6UXB1 125 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 TEX43Q6ZNM6 134 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 ZNF695Q8IW36 515 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 LIX1Q8N485 282 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 ZNF502Q8TBZ5 544 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 LKAAEAR1Q8TD35 194 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 CCDC126Q96EE4 140 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 CNDP1Q96KN2 507 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 TSNARE1Q96NA8 513 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 RPP21Q9H633 154 aaKnown RBP3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 ZNF629Q9UEG4 869 aaPredicted RBP3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 RABL2BQ9UNT1 228 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 ST3GAL6Q9Y274 331 aa3.03□□□□□ -1.92
HMGCS1-207ENST00000514610 OR2AG2A6NM03 316 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 CDC7O00311 574 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 CIB2O75838 187 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 SRP72O76094 671 aaKnown RBP3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 CALM1P0DP23 149 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 CALM2P0DP24 149 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 CALM3P0DP25 149 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 ZNF250P15622 560 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 IGFBP3P17936 291 aaPredicted RBP3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 TMED10P49755 219 aaKnown RBP3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 CDH6P55285 790 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 MXD1Q05195 221 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 SLC8B1Q6J4K2 584 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 ABHD13Q7L211 337 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 HDDC2Q7Z4H3 204 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 OAFQ86UD1 273 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 OR5B3Q8NH48 314 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 SLC7A13Q8TCU3 470 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 ACMSDQ8TDX5 336 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 ELMO1Q92556 727 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 CREB3L1Q96BA8 519 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 SERPINB12Q96P63 405 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 CENPKQ9BS16 269 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 KCNJ16Q9NPI9 418 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 NECAP2Q9NVZ3 263 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 OR12D3Q9UGF7 316 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 NOTCH2Q04721 2471 aa3.02□□□□□ -1.93
HMGCS1-207ENST00000514610 MROH7-TTC4A0A0A0MT08 1334 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 IGHV3-74A0A0B4J1X5 117 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 GLYATL1P3A0A0U1RQE8 302 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 AP3B1O00203 1094 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 RNF13O43567 381 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 WISP3O95389 354 aaPredicted RBP3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 PABPC4LP0CB38 370 aaKnown RBP3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 GDI1P31150 447 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 NAA10P41227 235 aaPredicted RBP3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 LRRC74AQ0VAA2 488 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 MAB21L1Q13394 359 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 CHRNA6Q15825 494 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 MRPL23Q16540 153 aaKnown RBP3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 LINC00483Q53H64 154 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms