RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	LAP3	P28838	519 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	RPS7	P62081	194 aa	Known RBP	13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	TFF3	Q07654	80 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	TSC22D1	Q15714	1073 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	GABRA6	Q16445	453 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	SGCA	Q16586	387 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	TBRG1	Q3YBR2	411 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	TIMM23B	Q5SRD1	257 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	LCN1P1	Q5VSP4	162 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	FBXW10	Q5XX13	1052 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	PLBD1	Q6P4A8	553 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	ZNF627	Q7L945	461 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	ZBTB46	Q86UZ6	589 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	CPO	Q8IVL8	374 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	OR6V1	Q8N148	313 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	OR10H5	Q8NGA6	315 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	OR9Q1	Q8NGQ5	310 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	TMEM163	Q8TC26	289 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	MUS81	Q96NY9	551 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	PITX2	Q99697	317 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	NELFA	Q9H3P2	528 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	SIAE	Q9HAT2	523 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	NGB	Q9NPG2	151 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	MOK	Q9UQ07	419 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	POLR1D	Q9Y2S0	133 aa		13.82	□□□□□ -0.2
SH3TC1-223	ENST00000513495	FLNC	Q14315	2725 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495		A0A096LPE4	126 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495		A0A1W2PPZ6	126 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	FAM183A	A6NL82	134 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495		H0YAE9	185 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	CASK	O14936	926 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	PRKY	O43930	277 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	SEC14L2	O76054	403 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	RNF224	P0DH78	156 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	SPI1	P17947	270 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	FMO3	P31513	532 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	FOXG1	P55316	489 aa	Predicted RBP	13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	IL18R1	Q13478	541 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	SLC36A2	Q495M3	483 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	KLHL12	Q53G59	568 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	IZUMO2	Q6UXV1	221 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	SLC16A14	Q7RTX9	510 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	GID4	Q8IVV7	300 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	SLC22A24	Q8N4F4	322 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	OR6K6	Q8NGW6	343 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	BCL2L2	Q92843	193 aa	Predicted RBP	13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	RFK	Q969G6	155 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	ZNF837	Q96EG3	531 aa	Predicted RBP	13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	BOD1	Q96IK1	185 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	TSSK2	Q96PF2	358 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	IL4I1	Q96RQ9	567 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	ADI1	Q9BV57	179 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	OR51V1	Q9H2C8	321 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	CCNB1IP1	Q9NPC3	277 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	SLC17A5	Q9NRA2	495 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	ZNF226	Q9NYT6	803 aa		13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	NDRG4	Q9ULP0	352 aa	Known RBP	13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	COA3	Q9Y2R0	106 aa	Predicted RBP	13.81	□□□□□ -0.2
SH3TC1-223	ENST00000513495	HCFC1	P51610	2035 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	IGLV1-36	A0A0B4J1U3	117 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	C12orf71	A8MTZ7	269 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	TMCC2	O75069	709 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	UBL3	O95164	117 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	ZNF823	P16415	610 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	CDA	P32320	146 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	CAPG	P40121	348 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	KIR2DL3	P43628	341 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	AQP4	P55087	323 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	PCBD1	P61457	104 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	PPA1	Q15181	289 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	HIKESHI	Q53FT3	197 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	SLC35D3	Q5M8T2	416 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	NXNL2	Q5VZ03	156 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	TMEM53	Q6P2H8	277 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495		Q96MT0	163 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	DDO	Q99489	341 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	WAC	Q9BTA9	647 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	CDADC1	Q9BWV3	514 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	NMNAT2	Q9BZQ4	307 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	RNF121	Q9H920	327 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	HINT3	Q9NQE9	182 aa	Known RBP	13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	POLE4	Q9NR33	117 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	CLN6	Q9NWW5	311 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	FBXL3	Q9UKT7	428 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	UGT2A1	Q9Y4X1	527 aa		13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	HELZ2	Q9BYK8	2649 aa	Known RBP	13.8	□□□□□ -0.2
SH3TC1-223	ENST00000513495	USP9X	Q93008	2570 aa	Predicted RBP	13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495	IGKV1D-43	A0A0B4J1Z2	117 aa		13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495		A1L4Q6	167 aa		13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495	SH3D21	A4FU49	640 aa		13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495	GLCE	O94923	617 aa		13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495	RAB36	O95755	333 aa		13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495	GYPB	P06028	91 aa		13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495	CD79A	P11912	226 aa		13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495	GRN	P28799	593 aa	Known RBP	13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495	PYCR1	P32322	319 aa		13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495	SNRPG	P62308	76 aa	Known RBP	13.79	□□□□□ -0.2
SH3TC1-223	ENST00000513495	IL5RA	Q01344	420 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms