RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CLDN25C9JDP6 229 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 STX16-NPEPL1H3BU86 382 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 STX16O14662 325 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ANKRD28O15084 1053 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 NME6O75414 186 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 KCNK2O95069 426 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 VAMP5O95183 116 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 PPP1R3DO95685 299 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 IGKV1D-16P01601 117 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 FGGP02679 453 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 PRB2P02812 416 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 CECR9P0C854 216 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF12P17014 697 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 CALCRP30988 508 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 TIA1P31483 386 aaKnown RBP eCLIP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 RAD52P43351 418 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ENTPD1P49961 510 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 MVDP53602 400 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 P2RX3P56373 397 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 SELENOVP59797 346 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 RPS23P62266 143 aaKnown RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF117Q03924 483 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 EMX1Q04741 257 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 PAX8Q06710 450 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF155Q12901 538 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 FOXF1Q12946 379 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 LCP2Q13094 533 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC17A1Q14916 467 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ZKSCAN8Q15776 578 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 HFEQ30201 348 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 GGTA1PQ4G0N0 100 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 HIKESHIQ53FT3 197 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 KLHL26Q53HC5 615 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 SYT14P1Q58G82 188 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ALG10Q5BKT4 473 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ALG10BQ5I7T1 473 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ATG16L1Q676U5 607 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 STEAP4Q687X5 459 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 TTC19Q6DKK2 380 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 FIP1L1Q6UN15 594 aaKnown RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 CBLN3Q6UW01 205 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 CDK20Q8IZL9 346 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ZSCAN4Q8NAM6 433 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 PCYOX1LQ8NBM8 494 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ATP6V1C2Q8NEY4 427 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 OR1K1Q8NGR3 316 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 OR5W2Q8NH69 310 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 SGCDQ92629 289 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 RAB8BQ92930 207 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 YIPF5Q969M3 257 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 EXOSC8Q96B26 276 aaKnown RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 TRIM44Q96DX7 344 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 SH3YL1Q96HL8 342 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 NAA11Q9BSU3 229 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 IFT27Q9BW83 186 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 MRPL37Q9BZE1 423 aaKnown RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 TPK1Q9H3S4 243 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ELOVL6Q9H5J4 265 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 ANKZF1Q9H8Y5 726 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 DDX18Q9NVP1 670 aaKnown RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 TMEM181Q9P2C4 612 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 SEC14L4Q9UDX3 406 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 LEF1Q9UJU2 399 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 PURGQ9UJV8 347 aaKnown RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 DHDHQ9UQ10 334 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 RCE1Q9Y256 329 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 WIPI2Q9Y4P8 454 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 INSIG2Q9Y5U4 225 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 FLVCR1Q9Y5Y0 555 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 TEX264Q9Y6I9 313 aa3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 TET2Q6N021 2002 aaPredicted RBP3.05□□□□□ -1.92
PDLIM5-218ENST00000513341 TRBV5-3A0A0A0MS03 114 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 IGHV2OR16-5A0A0B4J2B6 119 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 IGHV1-69-2A0A0G2JMI3 117 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 A0A1B0GUV1 79 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 GAGE12JA6NER3 117 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 C17orf100A8MU93 164 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 A8MXK9 166 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 SUPT3HB4E1H0 165 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF587BE7ETH6 402 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 TRAPPC2LH3BP13 241 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 RPL36A-HNRNPH2H7BZ11 118 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 UBXN8O00124 270 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 RHODO00212 210 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 OR7A17O14581 309 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF264O43296 627 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 SUPT3HO75486 399 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 TSPAN9O75954 239 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 KRT33AO76009 404 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 NDUFB8O95169 186 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 H6PDO95479 791 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 IGHMP01871 453 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 SFTPBP07988 381 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 IL3P08700 152 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF35P13682 527 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 CDH2P19022 906 aaPredicted RBP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 TCN1P20061 433 aaPredicted RBP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 IVDP26440 423 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 CRABP2P29373 138 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 ARL1P40616 181 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms