RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 MAS1LP35410 378 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 NAA10P41227 235 aaPredicted RBP2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 RFX3P48380 749 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 TMED10P49755 219 aaKnown RBP2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 SSR4P51571 173 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 CDH6P55285 790 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 SLAQ13239 276 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 GINS1Q14691 196 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 PON3Q15166 354 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 PTPN20Q4JDL3 420 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 HSP90AB3PQ58FF7 597 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 XKR7Q5GH72 579 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 ARMC12Q5T9G4 340 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 SASS6Q6UVJ0 657 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 OR10R2Q8NGX6 335 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 LRRC58Q96CX6 371 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 CNDP1Q96KN2 507 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 PKNOX2Q96KN3 472 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 TSNARE1Q96NA8 513 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 FOPNLQ96NB1 174 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 SERPINB12Q96P63 405 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 SLC29A1Q99808 456 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 NOX3Q9HBY0 568 aa2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 FGF20Q9NP95 211 aaPredicted RBP2.14□□□□□ -2.07
TRAPPC11-207ENST00000511409 USP47Q96K76 1375 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 PIKFYVEQ9Y2I7 2098 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 A0A1W2PP18 115 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 CLOCKO15516 846 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 DPM1O60762 260 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 ENTPD5O75356 428 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 ERLIN1O75477 346 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 OR2J3O76001 311 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 RAB3DO95716 219 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 GNAO1P09471 354 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZNF250P15622 560 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 RPS2P15880 293 aaKnown RBP2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZNF43P17038 809 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 EIF2S2P20042 333 aaKnown RBP2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 OMGP23515 440 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 CEACAM6P40199 344 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 CDKN2BP42772 138 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 NSG1P42857 185 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 PFN3P60673 137 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 EBI3Q14213 229 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 KCTD19Q17RG1 926 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 PPM1LQ5SGD2 360 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 PRAMEF20Q5VT98 475 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 RAET1LQ5VY80 246 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 ANKRD22Q5VYY1 191 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 C12orf56Q8IXR9 622 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 CNPY4Q8N129 248 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 CYB561D1Q8N8Q1 229 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 OR4S2Q8NH73 311 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 OR5B12Q96R08 314 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 SLC40A1Q9NP59 571 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 LHX9Q9NQ69 397 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 UXTQ9UBK9 157 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 PITPNC1Q9UKF7 332 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 MROH7-TTC4A0A0A0MT08 1334 aa2.13□□□□□ -2.07
TRAPPC11-207ENST00000511409 GLYATL1P3A0A0U1RQE8 302 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 CTAGE15A4D2H0 777 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 C9JVG2 144 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 H0YHG0 523 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 SLC25A14O95258 325 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 TSPAN13O95857 204 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 PABPC4LP0CB38 370 aaKnown RBP2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZNF823P16415 610 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 RRM2P31350 389 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 FOXN2P32314 431 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 TNNT2P45379 298 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 RAP1AP62834 184 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 ADARB1P78563 741 aaKnown RBP2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 TGM3Q08188 693 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 ERCC8Q13216 396 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 SRSF5Q13243 272 aaKnown RBP2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 MAB21L1Q13394 359 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 RCN1Q15293 331 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 MRPL23Q16540 153 aaKnown RBP2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 POU2AF1Q16633 256 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 VAX1Q5SQQ9 334 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 C9orf135Q5VTT2 229 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZNF691Q5VV52 312 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 CARD17Q5XLA6 110 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 TEX43Q6ZNM6 134 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 HDDC2Q7Z4H3 204 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 CTAGE6Q86UF2 777 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 SAXO1Q8IYX7 474 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 STPG2Q8N412 459 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 FAM86B1Q8N7N1 296 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 FBXL13Q8NEE6 735 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 OR7G2Q8NG99 324 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 OR10G2Q8NGC3 310 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 OR10G4Q8NGN3 311 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 RAB3IL1Q8TBN0 382 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 TM4SF18Q96CE8 201 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 ZNF578Q96N58 590 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 LINC00597Q9H2U6 94 aa2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 MN1Q10571 1320 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC11-207ENST00000511409 LRP4O75096 1905 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms