RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 PDSS1Q5T2R2 415 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 CPTPQ5TA50 214 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 LIPJQ5W064 366 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 STEAP4Q687X5 459 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 FCRLAQ7L513 359 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 SSX8Q7RTT4 187 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 TMEM139Q8IV31 216 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 METTL4Q8N3J2 472 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 C17orf53Q8N3J3 647 aaPredicted RBP4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 TEX9Q8N6V9 391 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 WDR31Q8NA23 367 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 ZNF540Q8NDQ6 660 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 OR7G2Q8NG99 324 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 OR9A2Q8NGT5 310 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 OR52N5Q8NH56 324 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 MAIP1Q8WWC4 291 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 ZNF75CPQ92670 426 aaPredicted RBP4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 EXT2Q93063 718 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 CFAP36Q96G28 342 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 ZNF300Q96RE9 604 aaPredicted RBP4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 ATOH8Q96SQ7 321 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 SERPINI1Q99574 410 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 PSD2Q9BQI7 771 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 C1QTNF6Q9BXI9 259 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 MRPL1Q9BYD6 325 aaKnown RBP4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 COQ10BQ9H8M1 238 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 ANKZF1Q9H8Y5 726 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 MYNNQ9NPC7 610 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 OPTCQ9UBM4 332 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 RNF11Q9Y3C5 154 aa4.3□□□□□ -1.72
CALCOCO2-212ENST00000509014 IGLV5-45A0A087WSX0 123 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 A0A087WZY1 265 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 TEX13DA0A0J9YY54 714 aaPredicted RBP4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 A0A1W2PRB8 838 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 B4DSR2 109 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 ATP6V1G2-DDX39BF2Z307 99 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 UBXN8O00124 270 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 PLXNB1O43157 2135 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 SLC22A3O75751 556 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 PIAS1O75925 651 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 UTS2O95399 124 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 IGKV1D-16P01601 117 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 IGFBP1P08833 259 aaPredicted RBP4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 PGCP20142 388 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 PCMT1P22061 227 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 SFTPDP35247 375 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 MMP15P51511 669 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 MAPK12P53778 367 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 PHEXP78562 749 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 EPS8Q12929 822 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 GAGE2BQ13066 116 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 GABRA6Q16445 453 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 GAGE2EQ4V326 116 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 FAM219BQ5XKK7 198 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 GAGE2AQ6NT46 116 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 Q6ZTC4 211 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 COMMD6Q7Z4G1 85 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 ISCA2Q86U28 154 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 L3MBTL4Q8NA19 623 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 POC5Q8NA72 575 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 CPNE4Q96A23 557 aaPredicted RBP4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 TMEM186Q96B77 213 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 ERP27Q96DN0 273 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 C17orf77Q96MU5 243 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 MUS81Q96NY9 551 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 UHRF2Q96PU4 802 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 SLC6A7Q99884 636 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 PKP2Q99959 881 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 NAT9Q9BTE0 207 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 CDC42EP4Q9H3Q1 356 aaKnown RBP4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 TSPY26PQ9H489 355 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 RHOJQ9H4E5 214 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 SLA2Q9H6Q3 261 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 ALG9Q9H6U8 611 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 MED17Q9NVC6 651 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 MED29Q9NX70 200 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 NSMCE4AQ9NXX6 385 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 NUDT4Q9NZJ9 180 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 GAGE2DQ9UEU5 116 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 PCDHGB4Q9UN71 923 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 FAF1Q9UNN5 650 aaPredicted RBP4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 CHMP2BQ9UQN3 213 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 ACOT9Q9Y305 439 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 OR10H1Q9Y4A9 318 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 TEX264Q9Y6I9 313 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 ZNF780BQ9Y6R6 833 aa4.29□□□□□ -1.72
CALCOCO2-212ENST00000509014 LOC105371242A0A075B767 164 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 ZNF724A8MTY0 619 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 SUPT3HB4E1H0 165 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 LYNX1G3V0Z9 82 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 OR7A17O14581 309 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 DVL1O14640 695 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 DNALI1O14645 258 aaPredicted RBP4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 AHCYL1O43865 530 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 PLOD3O60568 738 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 CYTIPO60759 359 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 KERAO60938 352 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 SUPT3HO75486 399 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 TSPAN9O75954 239 aa4.28□□□□□ -1.72
CALCOCO2-212ENST00000509014 PSMG1O95456 288 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms