RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 CD79AP11912 226 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 TNFRSF1BP20333 461 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 NR4A2P43354 598 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 CAPZA2P47755 286 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 OR1E2P47887 323 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 DAP3P51398 398 aaKnown RBP6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 UGT2B15P54855 530 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 PIGFQ07326 219 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 ST3GAL3Q11203 375 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 IKZF1Q13422 519 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 SNTB2Q13425 540 aaKnown RBP6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 TAF11Q15544 211 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 ANKDD1AQ495B1 522 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 ARMC4Q5T2S8 1044 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 C6orf52Q5T4I8 152 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 CYB5R2Q6BCY4 276 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 C8orf82Q6P1X6 216 aaPredicted RBP6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 HACD2Q6Y1H2 254 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 DEF8Q6ZN54 512 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 SPATC1Q76KD6 591 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 NANOGNBQ7Z5D8 188 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 ZNF584Q8IVC4 421 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 SKA3Q8IX90 412 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 MICU2Q8IYU8 434 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 BVESQ8NE79 360 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 TMEM255BQ8WV15 326 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 TMEM239Q8WW34 195 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 MRPL24Q96A35 216 aaKnown RBP6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 RCN3Q96D15 328 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 NMD3Q96D46 503 aaKnown RBP6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 SGTBQ96EQ0 304 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 RCC1LQ96I51 464 aaKnown RBP6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 PRRC1Q96M27 445 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 VRK1Q99986 396 aaPredicted RBP6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 PIMREGQ9BSJ6 248 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 EFCAB1Q9HAE3 211 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 SMURF2Q9HAU4 748 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 C20orf141Q9NUB4 165 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 ARMCX1Q9P291 453 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 CGGBP1Q9UFW8 167 aaPredicted RBP6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 PFDN2Q9UHV9 154 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 A4GNTQ9UNA3 340 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 SF3B6Q9Y3B4 125 aaKnown RBP6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 MED31Q9Y3C7 131 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 CMAHPQ9Y471 501 aa6.85□□□□□ -1.31
UBE2D3-222ENST00000508238 SVEP1Q4LDE5 3571 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 KRTAP9-6A0A140TA67 174 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 FFAR1O14842 300 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 SYNGR3O43761 229 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 FARS2O95363 451 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 STAMBPO95630 424 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 RAB36O95755 333 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 ERCC1P07992 297 aaPredicted RBP6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 IGHV4-31P0DP07 118 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 UMPSP11172 480 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 COX4I1P13073 169 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 ACADSP16219 412 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 THBS2P35442 1172 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 AQP2P41181 271 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 PTDSS1P48651 473 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 GZMKP49863 264 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 RPS23P62266 143 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 MRPS34P82930 218 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 LIPEQ05469 1076 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 RUNX1T1Q06455 604 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 C10orf128Q5T292 105 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 SPATA21Q7Z572 469 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 RNF113BQ8IZP6 322 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 OFCC1Q8IZS5 231 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 ZNF786Q8N393 782 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 SVOPLQ8N434 492 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 ANKS4BQ8N8V4 417 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 FAM156AQ8NDB6 213 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 PFN4Q8NHR9 129 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 FGFBP3Q8TAT2 258 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 ASB10Q8WXI3 467 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 MCHR2Q969V1 340 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 CMTM5Q96DZ9 223 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 NSRP1Q9H0G5 558 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 TXNIPQ9H3M7 391 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 MS4A5Q9H3V2 200 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 C1orf198Q9H425 327 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 SIAEQ9HAT2 523 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 INIPQ9NRY2 104 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 MAN2C1Q9NTJ4 1040 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 CDC42EP3Q9UKI2 254 aa6.84□□□□□ -1.31
UBE2D3-222ENST00000508238 NBEAL1Q6ZS30 2694 aa6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 SLC22A23A1A5C7 686 aa6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 GMNCA6NCL1 334 aa6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 NME4O00746 187 aa6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 SHOX2O60902 331 aaPredicted RBP6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 TRMUO75648 421 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 PRSS23O95084 383 aa6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 SNAP29O95721 258 aa6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 PTHP01270 115 aa6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 IFNA2P01563 188 aa6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 IFNW1P05000 195 aa6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 ADRA2AP08913 450 aa6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 MMP7P09237 267 aaPredicted RBP6.83□□□□□ -1.32
UBE2D3-222ENST00000508238 TACSTD2P09758 323 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms