RNA–Protein interactions for RNA: ENST00000507692.5

SNHG4-205, Transcript of small nucleolar RNA host gene 4, human

TSL 5

Gene SNHG4, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-205	ENST00000507692	PATE4	P0C8F1	98 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	RAP2A	P10114	183 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	CD99	P14209	185 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	ZNF14	P17017	642 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	ZNF26	P17031	533 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	FPR3	P25089	353 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	CALCR	P30988	508 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	SDHA	P31040	664 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	SLC6A6	P31641	620 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	CDKN1A	P38936	164 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	MAGEA2	P43356	314 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	GIPR	P48546	466 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	GSS	P48637	474 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	RPS6KA3	P51812	740 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	HMGA2	P52926	109 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	MRPS34	P82930	218 aa	Known RBP	4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	GALK2	Q01415	458 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	PLP2	Q04941	152 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	FMOD	Q06828	376 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	BNIP1	Q12981	228 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	TSPAN31	Q12999	210 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	SNTB2	Q13425	540 aa	Known RBP	4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	KRR1	Q13601	381 aa	Known RBP	4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	DAG1	Q14118	895 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	FLOT2	Q14254	428 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	RAB39A	Q14964	217 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	ETFDH	Q16134	617 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	SGCA	Q16586	387 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	MEST	Q5EB52	335 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	GPR139	Q6DWJ6	353 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	OR2T5	Q6IEZ7	315 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	RPL13AP3	Q6NVV1	102 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	C1orf94	Q6P1W5	598 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	SLC25A47	Q6Q0C1	308 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	DPY19L2P2	Q6ZN68	376 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	FAM122B	Q7Z309	247 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	YTHDF3	Q7Z739	585 aa	Known RBP	4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	ZER1	Q7Z7L7	766 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	ADCK1	Q86TW2	530 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	MYPOP	Q86VE0	399 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	AQP12A	Q8IXF9	295 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	LRRC18	Q8N456	261 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	ARIH2OS	Q8N7S6	290 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	WFDC11	Q8NEX6	87 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	NUP37	Q8NFH4	326 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	OR2T29	Q8NH02	315 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	ZNF519	Q8TB69	540 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	GNPDA2	Q8TDQ7	276 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	RASD2	Q96D21	266 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692		Q96M85	177 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	ZNF75A	Q96N20	296 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	GPX7	Q96SL4	187 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	SH3GL3	Q99963	347 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	C1orf198	Q9H425	327 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	REEP1	Q9H902	201 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	SEC61A2	Q9H9S3	476 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	SIAE	Q9HAT2	523 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	NOX3	Q9HBY0	568 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	CCNB1IP1	Q9NPC3	277 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	NRIP3	Q9NQ35	241 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	CA10	Q9NS85	328 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	IL20RA	Q9UHF4	553 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	ADAM18	Q9Y3Q7	739 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	SPEF1	Q9Y4P9	236 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	LYVE1	Q9Y5Y7	322 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	PMF1-BGLAP	U3KQ54	211 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	JMJD1C	Q15652	2540 aa		4.36	□□□□□ -1.71
SNHG4-205	ENST00000507692	FN1	P02751	2386 aa	Known RBP	4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	ANK3	Q12955	4377 aa	Known RBP	4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	IGKV1D-43	A0A0B4J1Z2	117 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	TEX13C	A0A0J9YWL9	993 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	DHRS12	A0PJE2	317 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	PRSS37	A4D1T9	235 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	C12orf71	A8MTZ7	269 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692		B9A039	149 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692		H7C1C5	153 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692		H7C417	338 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	GNGT2	O14610	69 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	GSC2	O15499	205 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	IDH3B	O43837	385 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	CCNB2	O95067	398 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	PPP1R3D	O95685	299 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	TXNDC12	O95881	172 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	REN	P00797	406 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	CST1	P01037	141 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	SERPINA5	P05154	406 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	CST2	P09228	141 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	MMP7	P09237	267 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	ZNF35	P13682	527 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	APEH	P13798	732 aa	Known RBP	4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	FOSL1	P15407	271 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	MSR1	P21757	451 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	NR4A1	P22736	598 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	NOS3	P29474	1203 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	CDA	P32320	146 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	APLNR	P35414	380 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	THBS4	P35443	961 aa		4.35	□□□□□ -1.71
SNHG4-205	ENST00000507692	GLRX	P35754	106 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms