RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SEC14L2O76054 403 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 SNAP29O95721 258 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 SCG5P05408 212 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 OR8G3PP0DMU2 310 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 NPR2P20594 1047 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 LAP3P28838 519 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 CDAP32320 146 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 SLC25A1P53007 311 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 LRRC36Q1X8D7 754 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 FAM27BQ5VT28 67 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 DNM1P34Q6PK57 102 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 KLHL24Q6TFL4 600 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 CCDC36Q8IYA8 594 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 CYB561A3Q8NBI2 242 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 PTP4A1Q93096 173 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 HRASLS5Q96KN8 279 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 RDH12Q96NR8 316 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 MBOAT4Q96T53 435 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 MED18Q9BUE0 208 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 TEX12Q9BXU0 123 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 FN3KQ9H479 309 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 TOR3AQ9H497 397 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 RIBC2Q9H4K1 309 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 SIAEQ9HAT2 523 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 SRA1Q9HD15 236 aaKnown RBP11.23□□□□□ -0.61
TCOF1-210ENST00000506767 RPRD1BQ9NQG5 326 aaKnown RBP11.23□□□□□ -0.61
TCOF1-210ENST00000506767 B3GNT2Q9NY97 397 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 KCNN3Q9UGI6 736 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 COA3Q9Y2R0 106 aaPredicted RBP11.23□□□□□ -0.61
TCOF1-210ENST00000506767 ORC6Q9Y5N6 252 aa11.23□□□□□ -0.61
TCOF1-210ENST00000506767 A0A1W2PR80 420 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 ZNF503-AS2A6NEH8 195 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 ATP6V1G2O95670 118 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 ZNF3P17036 446 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 CRYGSP22914 178 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 PAX7P23759 505 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 DBPQ10586 325 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-210ENST00000506767 DAZAP2Q15038 168 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-210ENST00000506767 PPA1Q15181 289 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 SNAPC1Q16533 368 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 KCNMB1Q16558 191 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 ZIK1Q3SY52 487 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-210ENST00000506767 GLB1L2Q8IW92 636 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 SKA3Q8IX90 412 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 OR52N5Q8NH56 324 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 ZNRF4Q8WWF5 429 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 NRG4Q8WWG1 115 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 HTRA1Q92743 480 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 MUCL1Q96DR8 90 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 ZC3HAV1LQ96H79 300 aaKnown RBP11.22□□□□□ -0.61
TCOF1-210ENST00000506767 SLC38A2Q96QD8 506 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 HCAR1Q9BXC0 346 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 POLE4Q9NR33 117 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 ZNF226Q9NYT6 803 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 TVP23BQ9NYZ1 205 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 NPAP1Q9NZP6 1156 aa11.22□□□□□ -0.61
TCOF1-210ENST00000506767 A0A1W2PPL8 197 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 FAM221AA4D161 298 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 FAM183AA6NL82 134 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 PRKYO43930 277 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 FARS2O95363 451 aaKnown RBP11.21□□□□□ -0.61
TCOF1-210ENST00000506767 WNT11O96014 354 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 GAAP10253 952 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 CLUP10909 449 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 COX6B1P14854 86 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 SPI1P17947 270 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 HOXC12P31275 282 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 UBE2NP61088 152 aaKnown RBP11.21□□□□□ -0.61
TCOF1-210ENST00000506767 SGCAQ16586 387 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 LINC01590Q5TEZ4 76 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 GALNT4Q8N4A0 578 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 FAM169BQ8N8A8 192 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 OR9Q1Q8NGQ5 310 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 OR2T4Q8NH00 348 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 FGFBP3Q8TAT2 258 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 ZNF75AQ96N20 296 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 PITX2Q99697 317 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 SH3GL3Q99963 347 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 PRRG3Q9BZD7 231 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 SEC61A2Q9H9S3 476 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 HINT3Q9NQE9 182 aaKnown RBP11.21□□□□□ -0.61
TCOF1-210ENST00000506767 FAM118AQ9NWS6 357 aa11.21□□□□□ -0.61
TCOF1-210ENST00000506767 SMPD3Q9NY59 655 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-210ENST00000506767 CRNNQ9UBG3 495 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-210ENST00000506767 NDRG4Q9ULP0 352 aaKnown RBP11.21□□□□□ -0.61
TCOF1-210ENST00000506767 DEFB108AA8MXU0 73 aa11.2□□□□□ -0.62
TCOF1-210ENST00000506767 PRR23D1E9PI22 279 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-210ENST00000506767 CASKO14936 926 aa11.2□□□□□ -0.62
TCOF1-210ENST00000506767 SLC16A6O15403 523 aa11.2□□□□□ -0.62
TCOF1-210ENST00000506767 SIAH2O43255 324 aa11.2□□□□□ -0.62
TCOF1-210ENST00000506767 GOSR1O95249 250 aa11.2□□□□□ -0.62
TCOF1-210ENST00000506767 MPZL1O95297 269 aa11.2□□□□□ -0.62
TCOF1-210ENST00000506767 GPANK1O95872 356 aa11.2□□□□□ -0.62
TCOF1-210ENST00000506767 IGKV3-15P01624 115 aa11.2□□□□□ -0.62
TCOF1-210ENST00000506767 HLA-HP01893 362 aa11.2□□□□□ -0.62
TCOF1-210ENST00000506767 TFP02787 698 aa11.2□□□□□ -0.62
TCOF1-210ENST00000506767 CST2P09228 141 aa11.2□□□□□ -0.62
TCOF1-210ENST00000506767 MMP7P09237 267 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-210ENST00000506767 PRR23D2P0DMB1 279 aaPredicted RBP11.2□□□□□ -0.62
TCOF1-210ENST00000506767 CBR1P16152 277 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms