RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 A0A1W2PPL8 197 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 H0YC42 278 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 GPRIN2O60269 458 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 RAMP1O60894 148 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 ATE1O95260 518 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 CD1AP06126 327 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 QDPRP09417 244 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 SPARCP09486 303 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 ALOX5APP20292 161 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 TGM4P49221 684 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 OR12D2P58182 307 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 SIRPAP78324 504 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 FMODQ06828 376 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 EIF2B1Q14232 305 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 DGUOKQ16854 277 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 TP53I3Q53FA7 332 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 C10orf128Q5T292 105 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 RPL22L1Q6P5R6 122 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 SLC25A47Q6Q0C1 308 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 Q6ZS92 163 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 ATCAYQ86WG3 371 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 GPR137CQ8N3F9 429 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 MS4A15Q8N5U1 240 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 YIPF7Q8N8F6 280 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 OR2AJ1Q8NGZ0 328 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 ROBO4Q8WZ75 1007 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 NSMAFQ92636 917 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 TMEM54Q969K7 222 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 MCHR2Q969V1 340 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 TIMP4Q99727 224 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 MROQ9BYG7 248 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 ULBP2Q9BZM5 246 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 KCNN2Q9H2S1 579 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 ISG20L2Q9H9L3 353 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 GP6Q9HCN6 339 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 CAMK2AQ9UQM7 478 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 CSAG2Q9Y5P2 127 aa10.69□□□□□ -0.7
POLR2J3-211ENST00000506060 CFAP54Q96N23 3096 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 A0A1B0GVC2 190 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 A0A1W2PPW3 197 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 ZNF716A6NP11 495 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 ZNF724A8MTY0 619 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 AQP7O14520 342 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 PLPP2O43688 288 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 MRPL33O75394 65 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 ZNF254O75437 659 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 KRT33AO76009 404 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 ITGB2P05107 769 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 ADRB1P08588 477 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 EDNRAP25101 427 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 SOX6P35712 828 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 ZNF133P52736 654 aaPredicted RBP10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 HCCSP53701 268 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 VBP1P61758 197 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 LSM3P62310 102 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 KCNMB1Q16558 191 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 RIPPLY2Q5TAB7 128 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 DEGS2Q6QHC5 323 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 PAMR1Q6UXH9 720 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 KRT77Q7Z794 578 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 C20orf196Q8IYI0 205 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 TMEM123Q8N131 208 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 RNF128Q8TEB7 428 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 FAM122AQ96E09 287 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 PELI1Q96FA3 418 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 ZNF385AQ96PM9 386 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 DCUN1D5Q9BTE7 237 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 OR51E2Q9H255 320 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 SEC61A2Q9H9S3 476 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 GLRX2Q9NS18 164 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 MRPL22Q9NWU5 206 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 COPS3Q9UNS2 423 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 B3GNT3Q9Y2A9 372 aa10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 NOSIPQ9Y314 301 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-211ENST00000506060 ARPC4-TTLL3A0A0A6YYG9 625 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 PNMA8CA0A1B0GUJ8 204 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 TRDV1A0A1B0GX56 115 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 OR14I1A6ND48 311 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 OGG1O15527 345 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 DHHO43323 396 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 RGS9O75916 674 aaPredicted RBP10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 ZNF432O94892 652 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 GAAP10253 952 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 KLK2P20151 261 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 NPR2P20594 1047 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 MSR1P21757 451 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 NR4A1P22736 598 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 FGF9P31371 208 aaPredicted RBP10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 CD79BP40259 229 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 RIDAP52758 137 aaKnown RBP10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 LSM6P62312 80 aaKnown RBP10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 PMP22Q01453 160 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 ROM1Q03395 351 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 STK11Q15831 433 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 ETFDHQ16134 617 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 TBR1Q16650 682 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 PCK2Q16822 640 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 RNFT1Q5M7Z0 435 aa10.67□□□□□ -0.7
POLR2J3-211ENST00000506060 ARL9Q6T311 187 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms