RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 HIF3AQ9Y2N7 669 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 ZNF503-AS2A6NEH8 195 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 ARRDC5A6NEK1 342 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 H3BNX3 289 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 F13BP05160 661 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 CALCRP30988 508 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 AQP2P41181 271 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 CLRN1P58418 232 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 DSCR9P59020 149 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 PIGFQ07326 219 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 ANKDD1AQ495B1 522 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 ZBED5Q49AG3 693 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 SHQ1Q6PI26 577 aaKnown RBP13.3□□□□□ -0.28
NUP50-219ENST00000497960 CLEC2AQ6UVW9 174 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 ZER1Q7Z7L7 766 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 TMEM179BQ7Z7N9 219 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 ICA1LQ8NDH6 482 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 NUP37Q8NFH4 326 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 OR5K1Q8NHB7 308 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 MOSPD2Q8NHP6 518 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 POM121Q96HA1 1249 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 SEMA6AQ9H2E6 1030 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 B3GNT2Q9NY97 397 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 STX18Q9P2W9 335 aaKnown RBP13.3□□□□□ -0.28
NUP50-219ENST00000497960 ABCA1O95477 2261 aa13.3□□□□□ -0.28
NUP50-219ENST00000497960 IGHV2OR16-5A0A0B4J2B6 119 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 CENPBD1B2RD01 187 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 B9A039 149 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 DHHO43323 396 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 RRP9O43818 475 aaKnown RBP13.29□□□□□ -0.28
NUP50-219ENST00000497960 UBL3O95164 117 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 FARS2O95363 451 aaKnown RBP13.29□□□□□ -0.28
NUP50-219ENST00000497960 RAB36O95755 333 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 QDPRP09417 244 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 OR4A8P0C604 315 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 PGA4P0DJD7 388 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 PGA3P0DJD8 388 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 OR8G3PP0DMU2 310 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 RPL4P36578 427 aaKnown RBP13.29□□□□□ -0.28
NUP50-219ENST00000497960 GSSP48637 474 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 EFNA4P52798 201 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 TSPAN31Q12999 210 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 TOP3AQ13472 1001 aaPredicted RBP13.29□□□□□ -0.28
NUP50-219ENST00000497960 SWI5Q1ZZU3 235 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 C1orf94Q6P1W5 598 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 LRFN4Q6PJG9 635 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 DNM1P46Q6ZS02 220 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 MYPOPQ86VE0 399 aaPredicted RBP13.29□□□□□ -0.28
NUP50-219ENST00000497960 IGFN1Q86VF2 1251 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 HS3ST5Q8IZT8 346 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 GPA33Q99795 319 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 ZNF442Q9H7R0 627 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 ZNF556Q9HAH1 456 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 FBXL3Q9UKT7 428 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 SIGLEC7Q9Y286 467 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 ARFGEF3Q5TH69 2177 aa13.29□□□□□ -0.28
NUP50-219ENST00000497960 FN1P02751 2386 aaKnown RBP13.28□□□□□ -0.28
NUP50-219ENST00000497960 SAC3D1A6NKF1 404 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 H0YHG0 523 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 NDUFB2O95178 105 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 GASTP01350 101 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 TSPAN19P0C672 248 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 HOXB4P17483 251 aaPredicted RBP13.28□□□□□ -0.28
NUP50-219ENST00000497960 GIPRP48546 466 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
NUP50-219ENST00000497960 ZNF84P51523 738 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 RAB1AP62820 205 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 HGFACQ04756 655 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 EFNB3Q15768 340 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 ADIPOQQ15848 244 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 MST1LQ2TV78 715 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 ZNF770Q6IQ21 691 aaPredicted RBP13.28□□□□□ -0.28
NUP50-219ENST00000497960 SMARCD3Q6STE5 483 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 ZNF620Q6ZNG0 422 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 HIPK1Q86Z02 1210 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 ZDHHC13Q8IUH4 622 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 SVOPLQ8N434 492 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 SLC22A24Q8N4F4 322 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 ATG16L2Q8NAA4 619 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 NOXO1Q8NFA2 376 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 OR52L1Q8NGH7 329 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 ASB10Q8WXI3 467 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 HTRA1Q92743 480 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 CENPNQ96H22 339 aaPredicted RBP13.28□□□□□ -0.28
NUP50-219ENST00000497960 TNFRSF13CQ96RJ3 184 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 PKP2Q99959 881 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 DGCR6LQ9BY27 220 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 OR52D1Q9H346 318 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 NTN4Q9HB63 628 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 TMEM38BQ9NVV0 291 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 FBXO9Q9UK97 447 aaPredicted RBP13.28□□□□□ -0.28
NUP50-219ENST00000497960 SPEF1Q9Y4P9 236 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 FKBP7Q9Y680 259 aa13.28□□□□□ -0.28
NUP50-219ENST00000497960 G3V2T6 193 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 SOX14O95416 240 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 CSF3P09919 207 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 NR2C1P13056 603 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 ACADSP16219 412 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 NPR2P20594 1047 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 GSTM3P21266 225 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms