RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 BOD1Q96IK1 185 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 MUS81Q96NY9 551 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 HCAR1Q9BXC0 346 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 OR10A4Q9H209 315 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 SEC61A2Q9H9S3 476 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 TMEM38BQ9NVV0 291 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 UGT2A1Q9Y4X1 527 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 FLNCQ14315 2725 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 PRODHO43272 600 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 FARS2O95363 451 aaKnown RBP19.1■□□□□ 0.65
C9orf3-222ENST00000496567 BLVRAP53004 296 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 GABRA6Q16445 453 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 C6orf52Q5T4I8 152 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 NXNL2Q5VZ03 156 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 FOXL2NBQ6ZUU3 175 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 C17orf78Q8N4C9 275 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 ZNF184Q99676 751 aaPredicted RBP19.1■□□□□ 0.65
C9orf3-222ENST00000496567 OR51V1Q9H2C8 321 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 GYPBP06028 91 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 OR8G3PP0DMU2 310 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 CLUP10909 449 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 HOXB1P14653 301 aaPredicted RBP19.09■□□□□ 0.65
C9orf3-222ENST00000496567 B4GALT1P15291 398 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 HOXC12P31275 282 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 CDAP32320 146 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 PYCR1P32322 319 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 SORDQ00796 357 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 TSC22D1Q15714 1073 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 KLHL12Q53G59 568 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 SLC35D3Q5M8T2 416 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 SLC25A30Q5SVS4 291 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 MEDAGQ5VYS4 303 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 GID4Q8IVV7 300 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 ENTHD1Q8IYW4 607 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 SLC22A24Q8N4F4 322 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 BCL2L2Q92843 193 aaPredicted RBP19.09■□□□□ 0.65
C9orf3-222ENST00000496567 UBE2FQ969M7 185 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 NELFAQ9H3P2 528 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 SIAEQ9HAT2 523 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 ZNF226Q9NYT6 803 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 HSPE1-MOB4S4R3N1 261 aa19.09■□□□□ 0.65
C9orf3-222ENST00000496567 FAM171A2A8MVW0 826 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 SEC14L2O76054 403 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 CLIC3O95833 236 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 RNF224P0DH78 156 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 IL5RAQ01344 420 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 SGCAQ16586 387 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 AADACL4Q5VUY2 407 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 P2RY8Q86VZ1 359 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 CCDC36Q8IYA8 594 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 C8orf59Q8N0T1 100 aaPredicted RBP19.08■□□□□ 0.65
C9orf3-222ENST00000496567 OR6K6Q8NGW6 343 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 RHOXF1Q8NHV9 184 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 RASSF1Q9NS23 344 aa19.08■□□□□ 0.65
C9orf3-222ENST00000496567 KLF2Q9Y5W3 355 aaPredicted RBP19.08■□□□□ 0.65
C9orf3-222ENST00000496567 A0A096LPE4 126 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 A0A1W2PPZ6 126 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 GLCEO94923 617 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 HLA-DQA2P01906 255 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 PPP3CBP16298 524 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 MSR1P21757 451 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 SLC2A5P22732 501 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 FMO3P31513 532 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 PEX19P40855 299 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 RPS7P62081 194 aaKnown RBP19.07■□□□□ 0.64
C9orf3-222ENST00000496567 HSF2Q03933 536 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 APOFQ13790 326 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 TBRG1Q3YBR2 411 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 C1QTNF12Q5T7M4 302 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 KLHL24Q6TFL4 600 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 USP51Q70EK9 711 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 BBS1Q8NFJ9 593 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 OR51L1Q8NGJ5 315 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 RFKQ969G6 155 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 NABP1Q96AH0 204 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 Q96MT0 163 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 FOXN4Q96NZ1 517 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 ACTR6Q9GZN1 396 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 POLE4Q9NR33 117 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 RAB26Q9ULW5 256 aa19.07■□□□□ 0.64
C9orf3-222ENST00000496567 OR5H1A6NKK0 313 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 SNTNA6NMZ2 147 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 GNAO1P09471 354 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 GABRB1P18505 474 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 CCKARP32238 428 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 DBPQ10586 325 aaPredicted RBP19.06■□□□□ 0.64
C9orf3-222ENST00000496567 OCLNQ16625 522 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 HIKESHIQ53FT3 197 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 TIMM23BQ5SRD1 257 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 LCN1P1Q5VSP4 162 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 FAM27BQ5VT28 67 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 MEPCEQ7L2J0 689 aaKnown RBP19.06■□□□□ 0.64
C9orf3-222ENST00000496567 ZNRF4Q8WWF5 429 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 S100PBPQ96BU1 408 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 KCNN2Q9H2S1 579 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 OBP2BQ9NPH6 170 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 CLN6Q9NWW5 311 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 CACNA1CQ13936 2221 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 SLC22A31A6NKX4 558 aa19.06■□□□□ 0.64
C9orf3-222ENST00000496567 HRGP04196 525 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms