RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 STX11O75558 287 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 CRTAPO75718 401 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-212ENST00000496458 KLHL2O95198 593 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 IGF1P05019 195 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 CCL2P13500 99 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 ZNF32P17041 273 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 RRM2P31350 389 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 STK19P49842 368 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-212ENST00000496458 SLC26A2P50443 739 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 EFNB2P52799 333 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 MRPS15P82914 257 aaKnown RBP3.7□□□□□ -1.82
SF3B1-212ENST00000496458 OGDHQ02218 1023 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 ASPHQ12797 758 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 ZP4Q12836 540 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 C1orf61Q13536 156 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 TFDP1Q14186 410 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 GPR176Q14439 515 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 ITIH4Q14624 930 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 RAB35Q15286 201 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 SLC15A2Q16348 729 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 PRR4Q16378 134 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 SPECC1LQ69YQ0 1117 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 LEG1Q6P5S2 330 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 NDUFAF7Q7L592 441 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 ANKRD37Q7Z713 158 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 SERPINA9Q86WD7 417 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 ERI1Q8IV48 349 aaKnown RBP3.7□□□□□ -1.82
SF3B1-212ENST00000496458 MFSD6LQ8IWD5 586 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 CENPSQ8N2Z9 138 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 ZNF565Q8N9K5 539 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 GATSQ8NAP1 163 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 OR13C9Q8NGT0 318 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 ADIPOR1Q96A54 375 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 SLC38A2Q96QD8 506 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 ZNF184Q99676 751 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-212ENST00000496458 UQCC2Q9BRT2 126 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 TUBGCP2Q9BSJ2 902 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 ILKAPQ9H0C8 392 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-212ENST00000496458 NSRP1Q9H0G5 558 aaKnown RBP3.7□□□□□ -1.82
SF3B1-212ENST00000496458 VCXQ9H320 206 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 Q9H3A6 140 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 CENPHQ9H3R5 247 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 RMND1Q9NWS8 449 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 PSMC3IPQ9P2W1 217 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-212ENST00000496458 SLC7A8Q9UHI5 535 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 IKZF2Q9UKS7 526 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 MEMO1Q9Y316 297 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 ATP6V1DQ9Y5K8 247 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 TAF1LQ8IZX4 1826 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 LY75O60449 1722 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 MROH7-TTC4A0A0A0MT08 1334 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 CDHR2Q9BYE9 1310 aa3.7□□□□□ -1.82
SF3B1-212ENST00000496458 RGPD3A6NKT7 1758 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-212ENST00000496458 RGPD4Q7Z3J3 1758 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 RREB1Q92766 1687 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 PINLYPA6NC86 204 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 FBLL1A6NHQ2 334 aaKnown RBP3.69□□□□□ -1.82
SF3B1-212ENST00000496458 SERPINE3A8MV23 424 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 H3BMH7 237 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 TEX46H3BTG2 121 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 DLGAP1O14490 977 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 BCKDKO14874 412 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 TOXO94900 526 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 CLDN9O95484 217 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 PGCP20142 388 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 MDKP21741 143 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-212ENST00000496458 GYG1P46976 350 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 BLVRAP53004 296 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 ATP1B3P54709 279 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 CLDN18P56856 261 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 B2MP61769 119 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 CDK16Q00536 496 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 EWSR1Q01844 656 aaKnown RBP eCLIP3.69□□□□□ -1.82
SF3B1-212ENST00000496458 PLOD1Q02809 727 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-212ENST00000496458 CDH17Q12864 832 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 SLX4IPQ5VYV7 408 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 TWF2Q6IBS0 349 aaKnown RBP3.69□□□□□ -1.82
SF3B1-212ENST00000496458 SLC8B1Q6J4K2 584 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 PNCKQ6P2M8 343 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 TIFABQ6ZNK6 161 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 TRMT10CQ7L0Y3 403 aaKnown RBP3.69□□□□□ -1.82
SF3B1-212ENST00000496458 TRIM69Q86WT6 500 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 RNF175Q8N4F7 328 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 PROKR2Q8NFJ6 384 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 STXBP6Q8NFX7 210 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 OR5T3Q8NGG3 340 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 ADAMTS16Q8TE57 1224 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 KIFAP3Q92845 792 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 UPRTQ96BW1 309 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 CERS2Q96G23 380 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 ELMO2Q96JJ3 720 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 ZNF578Q96N58 590 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-212ENST00000496458 SLC30A2Q9BRI3 323 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 DRC3Q9H069 523 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 HDHD2Q9H0R4 259 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 GPN2Q9H9Y4 310 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-212ENST00000496458 SDHAF3Q9NRP4 125 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 DCAF13Q9NV06 445 aaKnown RBP3.69□□□□□ -1.82
SF3B1-212ENST00000496458 PTTG3PQ9NZH4 202 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 MBD2Q9UBB5 411 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms