RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ALKBH6Q3KRA9 238 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 RGS7BPQ6MZT1 257 aaPredicted RBP12.23□□□□□ -0.45
VTI1A-209ENST00000496445 SLC25A47Q6Q0C1 308 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 CBLL1Q75N03 491 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 IGFN1Q86VF2 1251 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 NRMQ8IXM6 262 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 RBM15BQ8NDT2 890 aaKnown RBP12.23□□□□□ -0.45
VTI1A-209ENST00000496445 CPEB3Q8NE35 698 aaKnown RBP12.23□□□□□ -0.45
VTI1A-209ENST00000496445 LZICQ8WZA0 190 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 YIPF5Q969M3 257 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 HSH2DQ96JZ2 352 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 TSPAN32Q96QS1 320 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 C1orf198Q9H425 327 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 SIAEQ9HAT2 523 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 SMURF2Q9HAU4 748 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 CDH20Q9HBT6 801 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 DUSP13Q9UII6 198 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 AP3M1Q9Y2T2 418 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 IGLV3-9A0A075B6K5 115 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 A0A1W2PPW3 197 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 RNF212BA8MTL3 300 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 PHF1O43189 567 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-209ENST00000496445 ZNF682O95780 498 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 IFNW1P05000 195 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 ZNF250P15622 560 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 ZNF32P17041 273 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 COL8A2P25067 703 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 APEX1P27695 318 aaKnown RBP12.22□□□□□ -0.45
VTI1A-209ENST00000496445 GSK3BP49841 420 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 CD47Q08722 323 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 TAF11Q15544 211 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 PABPC1L2AQ5JQF8 200 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 TSEN54Q7Z6J9 526 aaKnown RBP12.22□□□□□ -0.45
VTI1A-209ENST00000496445 ZNF519Q8TB69 540 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 GEMIN6Q8WXD5 167 aaKnown RBP12.22□□□□□ -0.45
VTI1A-209ENST00000496445 NSMAFQ92636 917 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 C1orf159Q96HA4 380 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 ALG12Q9BV10 488 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 MS4A5Q9H3V2 200 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 MED4Q9NPJ6 270 aa12.22□□□□□ -0.45
VTI1A-209ENST00000496445 STX18Q9P2W9 335 aaKnown RBP12.22□□□□□ -0.45
VTI1A-209ENST00000496445 ZNF346Q9UL40 294 aaKnown RBP12.22□□□□□ -0.45
VTI1A-209ENST00000496445 A0A087WUU8 490 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 IQCMA0A1B0GVH7 501 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 SLC22A23A1A5C7 686 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 CDC42EP2O14613 210 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 SERPINA1P01009 418 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 SAGP10523 405 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-209ENST00000496445 WNT5AP41221 380 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 MAGEB1P43366 347 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 CTXN1P60606 82 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 RPL27P61353 136 aaKnown RBP12.21□□□□□ -0.45
VTI1A-209ENST00000496445 HSF2Q03933 536 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 PRKCDQ05655 676 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 CCNIQ14094 377 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 TRAM2Q15035 370 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 IFI44LQ53G44 452 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 HSP90B2PQ58FF3 399 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 TMEM255AQ5JRV8 349 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 TBPL2Q6SJ96 375 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 FOXL2NBQ6ZUU3 175 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 OR13C2Q8NGS9 318 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 GTF3AQ92664 365 aaKnown RBP12.21□□□□□ -0.45
VTI1A-209ENST00000496445 HPS1Q92902 700 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 HOPXQ9BPY8 73 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-209ENST00000496445 FNDC11Q9BVV2 318 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 TAAR3PQ9P1P4 343 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 ABCD2Q9UBJ2 740 aa12.21□□□□□ -0.45
VTI1A-209ENST00000496445 TANC2Q9HCD6 1990 aa12.21□□□□□ -0.46
VTI1A-209ENST00000496445 HTR3EA5X5Y0 456 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 WNT9BO14905 357 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 CCDC22O60826 627 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 RP2O75695 350 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 PTHP01270 115 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 LCKP06239 509 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 NCK1P16333 377 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 ZNF26P17031 533 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-209ENST00000496445 SRD5A1P18405 259 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 ACHEP22303 614 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 APLNRP35414 380 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 GPR4P46093 362 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 NUDT2P50583 147 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 CDH15P55291 814 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 UCP2P55851 309 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 KLF3P57682 345 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-209ENST00000496445 ERVK-25P63136 954 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 PLP2Q04941 152 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 SGCAQ16586 387 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 NKPD1Q17RQ9 610 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 CR1LQ2VPA4 569 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 HACD2Q6Y1H2 254 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 MBOAT2Q6ZWT7 520 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 ZNF101Q8IZC7 436 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 LINC01356Q8N9X3 169 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 OR1J2Q8NGS2 313 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 OR51A7Q8NH64 312 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 AKR7LQ8NHP1 331 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 SYNPRQ8TBG9 265 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 ACOT11Q8WXI4 607 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-209ENST00000496445 RDH5Q92781 318 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms