RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ALPLP05186 524 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 CTLA4P16410 223 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 PAICSP22234 425 aaKnown RBP14.96□□□□□ -0.01
HDAC6-235ENST00000495515 PTGES3Q15185 160 aaKnown RBP14.96□□□□□ -0.01
HDAC6-235ENST00000495515 SGCAQ16586 387 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 SLC36A2Q495M3 483 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 HIST2H2BCQ6DN03 193 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 SLC16A14Q7RTX9 510 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 GLB1L2Q8IW92 636 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 SLC37A3Q8NCC5 494 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 NPEPL1Q8NDH3 523 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 OR2T4Q8NH00 348 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 RACGAP1Q9H0H5 632 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 SRA1Q9HD15 236 aaKnown RBP14.96□□□□□ -0.01
HDAC6-235ENST00000495515 RPRD1BQ9NQG5 326 aaKnown RBP14.96□□□□□ -0.01
HDAC6-235ENST00000495515 C8orf4Q9NR00 106 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 TMEFF2Q9UIK5 374 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-235ENST00000495515 UGT2A1Q9Y4X1 527 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 OR6C68A6NDL8 312 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 CD79AP11912 226 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 MSR1P21757 451 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 LAP3P28838 519 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 ARR3P36575 388 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 CENPAP49450 140 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 GLO1Q04760 184 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 NPRL3Q12980 569 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 TRIP10Q15642 601 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 GSG1Q2KHT4 349 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 FAM27BQ5VT28 67 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 ZNF787Q6DD87 383 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 ACSM5Q6NUN0 579 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 TMEM108Q6UXF1 575 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 FOXL2NBQ6ZUU3 175 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 FAM169BQ8N8A8 192 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 GABARAPL3Q9BY60 117 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 RIBC2Q9H4K1 309 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 FBXL3Q9UKT7 428 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 B9D1Q9UPM9 204 aa14.95□□□□□ -0.02
HDAC6-235ENST00000495515 RAB36O95755 333 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 HLA-HP01893 362 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 CBR1P16152 277 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 PTAFRP25105 342 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 CDAP32320 146 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 ZNF83P51522 516 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 SLC25A1P53007 311 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 PCBD1P61457 104 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 TLE4Q04727 773 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 CRMP1Q14194 572 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 ETFDHQ16134 617 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 SNAPC1Q16533 368 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 ZNF362Q5T0B9 420 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-235ENST00000495515 TMEM53Q6P2H8 277 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 ZBTB46Q86UZ6 589 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 SKA3Q8IX90 412 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 OR6V1Q8N148 313 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 CYB561A3Q8NBI2 242 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 SH3GL3Q99963 347 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 WACQ9BTA9 647 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 RNF121Q9H920 327 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 CCNB1IP1Q9NPC3 277 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 POLE4Q9NR33 117 aa14.94□□□□□ -0.02
HDAC6-235ENST00000495515 COA3Q9Y2R0 106 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-235ENST00000495515 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-235ENST00000495515 ZAR1LA6NP61 321 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 C12orf71A8MTZ7 269 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 DEFB108AA8MXU0 73 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 PRR23D1E9PI22 279 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-235ENST00000495515 M0R1B8 84 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 SURF4O15260 269 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 PRR23D2P0DMB1 279 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-235ENST00000495515 BLVRAP53004 296 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 TUBA1BP68363 451 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 TUBA4AP68366 448 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 C3orf36Q3SXR2 165 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 SLX4IPQ5VYV7 408 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 TMEM236Q5W0B7 351 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 TUBA1AQ71U36 451 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 ZNF295-AS1Q8N0V1 137 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 LRRC18Q8N456 261 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 PROKR2Q8NFJ6 384 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 NABP1Q96AH0 204 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 OTULINQ96BN8 352 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 PIK3IP1Q96FE7 263 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 PLPPR2Q96GM1 343 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 TSSK2Q96PF2 358 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 DDOQ99489 341 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 C1QTNF6Q9BXI9 259 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 TVP23BQ9NYZ1 205 aa14.93□□□□□ -0.02
HDAC6-235ENST00000495515 IGLV1-36A0A0B4J1U3 117 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 CTAG2O75638 210 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 HLA-DQA2P01906 255 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 CD3EP07766 207 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 CST2P09228 141 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 PTDSS1P48651 473 aaKnown RBP14.92□□□□□ -0.02
HDAC6-235ENST00000495515 LSM6P62312 80 aaKnown RBP14.92□□□□□ -0.02
HDAC6-235ENST00000495515 RAB1AP62820 205 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 PLP2Q04941 152 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 PIGFQ07326 219 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 NCMAPQ5T1S8 102 aa14.92□□□□□ -0.02
HDAC6-235ENST00000495515 SEZ6L2Q6UXD5 910 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms