RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CD8AP01732 235 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 OSMP13725 252 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 JUNBP17275 347 aaPredicted RBP11.51□□□□□ -0.57
ERCC3-209ENST00000494464 PTNP21246 168 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 EPHA2P29317 976 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 TTKP33981 857 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 IFNGR2P38484 337 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 CDKN1AP38936 164 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 TAS2R41P59536 307 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 POU3F1Q03052 451 aaPredicted RBP11.51□□□□□ -0.57
ERCC3-209ENST00000494464 ST3GAL3Q11203 375 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 COX10Q12887 443 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 PMS2P3Q13401 168 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 TRAM2Q15035 370 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 ZNF74Q16587 644 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 C11orf71Q6IPW1 123 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 ZNF544Q6NX49 715 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 PODNL1Q6PEZ8 512 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 NHLRC1Q6VVB1 395 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 PXKQ7Z7A4 578 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 ENTHD1Q8IYW4 607 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 FAM169BQ8N8A8 192 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 LRR1Q96L50 414 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 GSX1Q9H4S2 264 aaPredicted RBP11.51□□□□□ -0.57
ERCC3-209ENST00000494464 FKRPQ9H9S5 495 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 VCX3AQ9NNX9 186 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 PLCE1Q9P212 2302 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 SLC7A7Q9UM01 511 aa11.51□□□□□ -0.57
ERCC3-209ENST00000494464 USF3Q68DE3 2245 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 TRIM64BA6NI03 449 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 ZAR1LA6NP61 321 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 IGF2P01344 180 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 HLA-DOBP13765 273 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 GSTM3P21266 225 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 CRISP1P54107 249 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 UBE2NP61088 152 aaKnown RBP11.5□□□□□ -0.57
ERCC3-209ENST00000494464 C1orf94Q6P1W5 598 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 CIARTQ8N365 385 aaPredicted RBP11.5□□□□□ -0.57
ERCC3-209ENST00000494464 C10orf53Q8N6V4 93 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 CNIH3Q8TBE1 160 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 DGCR14Q96DF8 476 aaKnown RBP11.5□□□□□ -0.57
ERCC3-209ENST00000494464 SLC38A2Q96QD8 506 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 PRSS27Q9BQR3 290 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 KATNB1Q9BVA0 655 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 C1QTNF6Q9BXI9 259 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 GPR35Q9HC97 309 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 CCNB1IP1Q9NPC3 277 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 CBLN4Q9NTU7 201 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 REV1Q9UBZ9 1251 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 ZNF229Q9UJW7 825 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 TPRKBQ9Y3C4 175 aa11.5□□□□□ -0.57
ERCC3-209ENST00000494464 IGHV1-18A0A0C4DH31 117 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 ZNF99A8MXY4 864 aaPredicted RBP11.49□□□□□ -0.57
ERCC3-209ENST00000494464 MPZL2O60487 215 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 IGKV3-15P01624 115 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 IGLV1-44P01699 117 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 HEXAP06865 529 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 ADORA3P0DMS8 318 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 EEF1B2P24534 225 aaKnown RBP11.49□□□□□ -0.57
ERCC3-209ENST00000494464 RBM34P42696 430 aaKnown RBP11.49□□□□□ -0.57
ERCC3-209ENST00000494464 ZP4Q12836 540 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 CEACAM16Q2WEN9 425 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 ZBED5Q49AG3 693 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 ZNF627Q7L945 461 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 C20orf196Q8IYI0 205 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 FBXL14Q8N1E6 418 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 MUC15Q8N387 334 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 OR4K5Q8NGD3 323 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 FAM81AQ8TBF8 368 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 APH1BQ8WW43 257 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 IPCEF1Q8WWN9 437 aaPredicted RBP11.49□□□□□ -0.57
ERCC3-209ENST00000494464 ACOT11Q8WXI4 607 aaPredicted RBP11.49□□□□□ -0.57
ERCC3-209ENST00000494464 DUSP21Q9H596 190 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 BARX1Q9HBU1 254 aaPredicted RBP11.49□□□□□ -0.57
ERCC3-209ENST00000494464 CRLF2Q9HC73 371 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 NANSQ9NR45 359 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 PLCXD1Q9NUJ7 323 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 MED29Q9NX70 200 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 SCN3BQ9NY72 215 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 PCDHGB1Q9Y5G3 927 aa11.49□□□□□ -0.57
ERCC3-209ENST00000494464 A0A096LPE4 126 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 A0A1W2PPZ6 126 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 SLC35F4A4IF30 521 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 ATP6V1G2-DDX39BF2Z307 99 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 ZNF701M0R085 212 aaPredicted RBP11.48□□□□□ -0.57
ERCC3-209ENST00000494464 WBP4O75554 376 aaKnown RBP11.48□□□□□ -0.57
ERCC3-209ENST00000494464 OR6A2O95222 327 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 IGHV4-39P01824 125 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 ASAH2BP0C7U1 165 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 GABRB1P18505 474 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 AHCYP23526 432 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 FABP6P51161 128 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 CDC42P60953 191 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 SLC35A2P78381 396 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 ARF1P84077 181 aaKnown RBP11.48□□□□□ -0.57
ERCC3-209ENST00000494464 PTGES3Q15185 160 aaKnown RBP11.48□□□□□ -0.57
ERCC3-209ENST00000494464 CLEC12BQ2HXU8 276 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 CNPY1Q3B7I2 92 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 PHYHD1Q5SRE7 291 aa11.48□□□□□ -0.57
ERCC3-209ENST00000494464 SLX4IPQ5VYV7 408 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms