RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 RHCGQ9UBD6 479 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 NDRG3Q9UGV2 375 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 PRSS50Q9UI38 385 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 TMEM5Q9Y2B1 443 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 PLEKHA6Q9Y2H5 1048 aa5.9□□□□□ -1.46
VPS52-219ENST00000493379 HRNRQ86YZ3 2850 aaPredicted RBP5.9□□□□□ -1.47
VPS52-219ENST00000493379 MPDZO75970 2070 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 DHRS12A0PJE2 317 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 SH3D21A4FU49 640 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 DEFB108AA8MXU0 73 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 IMPA2O14732 288 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 ARPC3O15145 178 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 PIP5K1CO60331 668 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 UPK3AO75631 287 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 CTAG2O75638 210 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 DIRAS1O95057 198 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 CLEC2LP0C7M8 214 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 ADORA3P0DMS8 318 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 IFI30P13284 250 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 FPR3P25089 353 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 RRM2P31350 389 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 AQP2P41181 271 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 MTNR1BP49286 362 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 SELENOPP49908 381 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 FOXG1P55316 489 aaPredicted RBP5.89□□□□□ -1.47
VPS52-219ENST00000493379 CLDN17P56750 224 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 CBX1P83916 185 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 SRSF2Q01130 221 aaKnown RBP5.89□□□□□ -1.47
VPS52-219ENST00000493379 DBPQ10586 325 aaPredicted RBP5.89□□□□□ -1.47
VPS52-219ENST00000493379 COX10Q12887 443 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 TSPAN31Q12999 210 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 FLOT2Q14254 428 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 MICAQ29983 383 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 CT83Q5H943 113 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 ADAM5Q6NVV9 412 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 ZNF730Q6ZMV8 503 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 SLC35D2Q76EJ3 337 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 LINGO2Q7L985 606 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 FAM122BQ7Z309 247 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 ABHD12BQ7Z5M8 362 aaPredicted RBP5.89□□□□□ -1.47
VPS52-219ENST00000493379 OAFQ86UD1 273 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 GPAT4Q86UL3 456 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 UEVLDQ8IX04 471 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 CCDC36Q8IYA8 594 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 ZNF100Q8IYN0 542 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 CLDN22Q8N7P3 220 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 WDR31Q8NA23 367 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 LINC01560Q8TB33 94 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 ABHD4Q8TB40 342 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 FNDC8Q8TC99 324 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 BCL2L2Q92843 193 aaPredicted RBP5.89□□□□□ -1.47
VPS52-219ENST00000493379 DNAJA3Q96EY1 480 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 LRGUKQ96M69 825 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 ZNF75AQ96N20 296 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 TNFRSF13CQ96RJ3 184 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 TMEM204Q9BSN7 226 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 DGCR6LQ9BY27 220 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 TXNIPQ9H3M7 391 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 SMURF2Q9HAU4 748 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 NTN4Q9HB63 628 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 GPR35Q9HC97 309 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 INIPQ9NRY2 104 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 RASSF1Q9NS23 344 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 IL20Q9NYY1 176 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 STX18Q9P2W9 335 aaKnown RBP5.89□□□□□ -1.47
VPS52-219ENST00000493379 CRNNQ9UBG3 495 aaPredicted RBP5.89□□□□□ -1.47
VPS52-219ENST00000493379 SLC25A15Q9Y619 301 aa5.89□□□□□ -1.47
VPS52-219ENST00000493379 EPPK1P58107 5090 aaKnown RBP5.89□□□□□ -1.47
VPS52-219ENST00000493379 ARPC4-TTLL3A0A0A6YYG9 625 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 OR5H1A6NKK0 313 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 A6NNC1 897 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 VSTM5A8MXK1 200 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 NUDT19A8MXV4 375 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 EFCAB9A8MZ26 197 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 BLOC1S5-TXNDC5H3BN57 136 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 AKAP8O43823 692 aaKnown RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 IDH3BO43837 385 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 FKBP6O75344 327 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 PEX14O75381 377 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 SLC43A1O75387 559 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 OR6A2O95222 327 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 STAMBPO95630 424 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 BCL10O95999 233 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 GASTP01350 101 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 HRGP04196 525 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 CD14P08571 375 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 PGA4P0DJD7 388 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 PGA3P0DJD8 388 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 NQO1P15559 274 aaKnown RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 CBLP22681 906 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 AHCYP23526 432 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 GTF2E2P29084 291 aaKnown RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 IFNGR2P38484 337 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 SH3BGRP55822 239 aaPredicted RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 ACTR3P61158 418 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 RPL27P61353 136 aaKnown RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 POU3F1Q03052 451 aaPredicted RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 TGFBR3Q03167 851 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 C1DQ13901 141 aaKnown RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 ACKR1Q16570 336 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms