RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TMEFF1Q8IYR6 380 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 BLIDQ8IZY5 108 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 LGI4Q8N135 537 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 OR51S1Q8NGJ8 323 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 OR8U1Q8NH10 309 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 SFXN5Q8TD22 340 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ADAMTS17Q8TE56 1095 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 NARS2Q96I59 477 aaKnown RBP3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ITCHQ96J02 903 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 CAPZA3Q96KX2 299 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 MAGEB18Q96M61 343 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 FYTTD1Q96QD9 318 aaKnown RBP3.75□□□□□ -1.81
BRCA1-220ENST00000492859 OR6C1Q96RD1 312 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 PNKPQ96T60 521 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 GPR22Q99680 433 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 DOK1Q99704 481 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 FUNDC2Q9BWH2 189 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 OSBPL11Q9BXB4 747 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 CADM1Q9BY67 442 aaKnown RBP3.75□□□□□ -1.81
BRCA1-220ENST00000492859 SHARPINQ9H0F6 387 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 DEFB129Q9H1M3 183 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ACSS3Q9H6R3 686 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 RDH14Q9HBH5 336 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 SLC52A3Q9NQ40 469 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 SLC2A4RGQ9NR83 387 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 TAS2R13Q9NYV9 303 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 C1RLQ9NZP8 487 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 COPZ2Q9P299 210 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ST6GALNAC2Q9UJ37 374 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 JPT1Q9UK76 154 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ADAM29Q9UKF5 820 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 BAIAP2Q9UQB8 552 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 SLC17A4Q9Y2C5 497 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ASTN1O14525 1302 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 MED14O60244 1454 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 ARHGAP35Q9NRY4 1499 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 CENPVL1A0A0U1RR11 272 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 CENPVL3A0A0U1RRI6 287 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 A0A1B0GTW7 788 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 TINCRA0A1B0GVN0 87 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 TCRBV5S2A0A599 114 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 OR5H14A6NHG9 310 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 DHRS7CA6NNS2 312 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 RNF212BA8MTL3 300 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 B4DGG1 531 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 TRAPPC2LH3BP13 241 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 SIRPB1O00241 398 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 TNFRSF13BO14836 293 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 MSI1O43347 362 aaKnown RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 RGS14O43566 566 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 PRKAB2O43741 272 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 GGCTO75223 188 aaKnown RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 RAB36O95755 333 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 SLC25A27O95847 323 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 PTTG1O95997 202 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 GASTP01350 101 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 IGHG3P01860 377 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 C8GP07360 202 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 HIST1H2AGP0C0S8 130 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 DUX4L4P0CJ87 422 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 CD37P11049 281 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 UNGP13051 313 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 ALOX5APP20292 161 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 DCTP40126 519 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 GLP1RP43220 463 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 NR4A2P43354 598 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 CX3CR1P49238 355 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 AGTR2P50052 363 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 CLDN15P56746 228 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 CLDN20P56880 219 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 HSF1Q00613 529 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 GPR17Q13304 367 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 KIAA0141Q14154 515 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 UBXN2BQ14CS0 331 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 NSDHLQ15738 373 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 PABPC1L2AQ5JQF8 200 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 FFAR4Q5NUL3 377 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 GPRC6AQ5T6X5 926 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 FAM71E1Q6IPT2 247 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 HAGHLQ6PII5 290 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 PAQR6Q6TCH4 344 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 ENPP6Q6UWR7 440 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 RNF165Q6ZSG1 346 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 Q6ZSR9 355 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 COMMD7Q86VX2 200 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 NIT1Q86X76 327 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 SLC30A8Q8IWU4 369 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 IZUMO1Q8IYV9 350 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 BCL6BQ8N143 479 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 SLC39A11Q8N1S5 342 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 CLIP4Q8N3C7 705 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 C9orf62Q8N4C0 152 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 CLDN19Q8N6F1 224 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 EMC1Q8N766 993 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF676Q8N7Q3 588 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 NAT16Q8N8M0 369 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 LINC00116Q8NCU8 138 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 DMBX1Q8NFW5 382 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 OR56B4Q8NH76 319 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms